Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1765 and Ac3H11_1766 are separated by 317 nucleotidesAc3H11_1766 and Ac3H11_1779 are separated by 94 nucleotidesAc3H11_1779 and Ac3H11_1767 are separated by 74 nucleotidesAc3H11_1767 and Ac3H11_1768 are separated by 98 nucleotides Ac3H11_1765 - Selenide,water dikinase (EC 2.7.9.3), at 378,553 to 379,605 _1765 Ac3H11_1766 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 379,923 to 381,038 _1766 Ac3H11_1779 - tRNA-Ser-CGA, at 381,133 to 381,219 _1779 Ac3H11_1767 - L-lactate dehydrogenase (EC 1.1.2.3), at 381,294 to 382,553 _1767 Ac3H11_1768 - LysR family transcriptional regulator y2377 (Yersinia pestis KIM), at 382,652 to 383,551 _1768
Group Condition Ac3H11_1765 Ac3H11_1766 Ac3H11_1779 Ac3H11_1767 Ac3H11_1768
nitrogen source Ammonium chloride (N) -0.4 -0.5 N.D. -0.5 -1.3
nitrogen source L-Alanine (N) -0.5 -0.2 N.D. -0.4 -0.6
carbon source D-Lactate (C) -0.4 -0.3 N.D. -0.2 -0.6
stress Dimethyl Sulfoxide 6 vol% -0.4 -0.3 N.D. -0.2 -0.3
pH LB, pH5 -0.2 -0.2 N.D. -0.1 -0.5
stress Phosphomycin 0.06 mg/ml +0.2 -0.5 N.D. -0.3 -0.4
stress Polymyxin B sulfate 0.0001 mg/ml -0.2 +0.2 N.D. -0.2 -0.7
carbon source D-Fructose (C) -0.2 +0.0 N.D. -0.3 -0.4
stress Phosphomycin 0.02 mg/ml -0.1 -0.1 N.D. +0.1 -0.7
carbon source succinate (C) +0.2 -0.3 N.D. -0.7 -0.0
carbon source L-Lactate (C) -0.0 +0.1 N.D. -0.2 -0.6
stress Bacitracin 0.032 mg/ml -0.1 -0.1 N.D. +0.1 -0.6
stress Cobalt chloride 0.32 mM +0.0 +0.1 N.D. +0.0 -0.8
stress sodium fluoride 25 mM -0.4 +0.3 N.D. +0.0 -0.5
carbon source L-Arabinose (C) -0.0 +0.2 N.D. -0.0 -0.7
nitrogen source L-Threonine (N) +0.1 -0.5 N.D. -0.3 +0.1
stress Cobalt chloride 0.16 mM +0.1 +0.2 N.D. -0.1 -0.5
stress perchlorate 25 mM -0.2 +0.2 N.D. +0.2 -0.3
motility inner cut, R2A soft agar motility assay -0.6 +0.3 N.D. +0.1 -0.1
carbon source pyruvate (C) +0.0 +0.2 N.D. +0.1 -0.5
stress Cisplatin 0.005 mg/ml +0.3 +0.5 N.D. -0.3 -0.7
stress D-Cycloserine 0.05 mg/ml +0.7 -0.6 N.D. -0.2 +0.0
stress Paraquat dichloride 0.01 mg/ml +0.7 +0.3 N.D. -0.5 -0.5
stress Nickel (II) chloride 0.6 mM +0.1 +0.2 N.D. +0.2 -0.4
stress Cisplatin 0.0025 mg/ml +0.1 -0.2 N.D. +0.6 -0.0
phage phage 93.1 +0.2 -0.3 N.D. +0.2 +0.4
stress Zinc 1 mM +0.1 +0.4 N.D. +0.3 -0.3
phage phage 93.1 +0.1 +0.5 N.D. -0.2 +0.4
lb LB +0.3 +0.4 N.D. +0.3 -0.1
pH LB, pH10 +0.1 +0.1 N.D. +0.4 +0.2
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