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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_1705 and Ac3H11_1706 are separated by 181 nucleotides
Ac3H11_1706 and Ac3H11_1707 are separated by 177 nucleotides
Ac3H11_1707 and Ac3H11_1708 are separated by 19 nucleotides
Ac3H11_1708 and Ac3H11_1709 are separated by 196 nucleotides
Ac3H11_1705 - Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1), at 305,590 to 306,804
_1705
Ac3H11_1706 - Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases, at 306,986 to 308,260
_1706
Ac3H11_1707 - FIG00933533: hypothetical protein, at 308,438 to 310,291
_1707
Ac3H11_1708 - FIG00932121: hypothetical protein, at 310,311 to 310,616
_1708
Ac3H11_1709 - Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2), at 310,813 to 311,400
_1709
Group
Condition
Ac3H11
_1705
Ac3H11
_1706
Ac3H11
_1707
Ac3H11
_1708
Ac3H11
_1709
carbon source
propionate (C)
-5.7
+0.1
-0.1
+0.0
N.D.
nitrogen source
L-Arginine (N)
-5.1
-0.3
+0.0
+0.1
N.D.
nitrogen source
L-Leucine (N)
-4.6
-0.3
-0.1
-0.1
N.D.
nitrogen source
L-Glutamine (N)
-4.6
-0.1
+0.1
-0.2
N.D.
stress
2-Furfuraldehyde 0.06 vol%
-4.5
-0.2
-0.1
+0.0
N.D.
nitrogen source
Uridine (N)
-4.9
-0.2
+0.3
+0.0
N.D.
nitrogen source
L-Alanine (N)
-4.5
-0.2
+0.4
-0.2
N.D.
nitrogen source
Ammonium chloride (N)
-3.9
-0.3
-0.4
+0.2
N.D.
nitrogen source
L-tyrosine (N)
-3.8
-0.3
+0.0
+0.2
N.D.
stress
Dimethyl Sulfoxide 6 vol%
-3.4
+0.0
-0.2
-0.1
N.D.
stress
syringaldehyde 2.5 mM
-3.0
-0.0
-0.3
-0.1
N.D.
nitrogen source
D-Alanine (N)
-2.9
-0.5
-0.1
+0.4
N.D.
stress
nitrate 45 mM
-2.3
+0.0
-0.1
+0.0
N.D.
stress
Tetracycline 0.0001 mg/ml
-2.3
+0.2
-0.2
-0.1
N.D.
carbon source
pyruvate (C)
-1.1
-0.2
-0.3
-0.5
N.D.
nitrogen source
L-Isoleucine (N)
-2.3
+0.3
+0.0
+0.1
N.D.
carbon source
a-Ketoglutaric (C)
-1.3
-0.2
-0.3
-0.1
N.D.
nitrogen source
L-Proline (N)
-1.7
-0.2
-0.0
+0.1
N.D.
carbon source
D-Lactate (C)
-0.7
-0.4
-0.3
-0.3
N.D.
stress
Cobalt chloride 0.32 mM
-1.8
+0.0
+0.1
+0.0
N.D.
carbon source
D-Gluconic Acid (C)
-1.1
-0.2
-0.3
-0.0
N.D.
carbon source
D-Ribose (C)
-1.0
+0.1
-0.4
-0.1
N.D.
nitrogen source
L-Threonine (N)
-1.8
+0.5
-0.2
+0.3
N.D.
carbon source
D-Gluconic Acid (C)
-1.1
-0.1
-0.4
+0.3
N.D.
lb
LB
-1.3
-0.1
+0.0
+0.1
N.D.
pH
LB, pH5
-1.3
-0.3
+0.2
+0.2
N.D.
stress
Cisplatin 0.005 mg/ml
-0.4
-0.8
-0.4
+0.5
N.D.
stress
Bacitracin 0.016 mg/ml
-1.3
+0.1
-0.1
+0.2
N.D.
carbon source
succinate (C)
-0.7
-0.2
-0.4
+0.4
N.D.
carbon source
L-Glutamine (C)
-0.5
-0.3
+0.4
-0.4
N.D.
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