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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_1694 and Ac3H11_1695 are separated by 13 nucleotides
Ac3H11_1695 and Ac3H11_1696 are separated by 328 nucleotides
Ac3H11_1696 and Ac3H11_1697 are separated by 94 nucleotides
Ac3H11_1697 and Ac3H11_1698 overlap by 4 nucleotides
Ac3H11_1694 - ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, permease component 2
(from data)
, at 293,878 to 294,954
_1694
Ac3H11_1695 - ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, permease component 1
(from data)
, at 294,968 to 295,897
_1695
Ac3H11_1696 - FIG065221: Holliday junction DNA helicase, at 296,226 to 297,605
_1696
Ac3H11_1697 - Outer membrane lipoprotein carrier protein LolA, at 297,700 to 298,380
_1697
Ac3H11_1698 - Cell division protein FtsK, at 298,377 to 300,713
_1698
Group
Condition
Ac3H11
_1694
Ac3H11
_1695
Ac3H11
_1696
Ac3H11
_1697
Ac3H11
_1698
nitrogen source
L-Leucine (N)
-6.2
-6.0
-0.3
N.D.
N.D.
nitrogen source
L-Proline (N)
-5.5
-5.5
-0.4
N.D.
N.D.
nitrogen source
L-Phenylalanine (N)
-3.8
-3.7
-0.2
N.D.
N.D.
carbon source
L-Glutamine (C)
-2.9
-3.1
-0.4
N.D.
N.D.
nitrogen source
L-tyrosine (N)
-2.8
-2.9
-0.1
N.D.
N.D.
nitrogen source
L-Serine (N)
-1.9
-2.0
-0.1
N.D.
N.D.
temperature
LB 30C
-1.6
-1.6
-0.4
N.D.
N.D.
carbon source
casaminos (C)
-1.6
-1.4
-0.2
N.D.
N.D.
temperature
LB 30C
-1.2
-1.2
-0.3
N.D.
N.D.
nitrogen source
Ammonium chloride (N)
-1.2
-1.3
-0.1
N.D.
N.D.
nitrogen source
L-Isoleucine (N)
-1.1
-1.0
-0.2
N.D.
N.D.
nitrogen source
L-Glutamine (N)
-1.1
-0.9
-0.4
N.D.
N.D.
temperature
LB 23C
-1.0
-1.0
-0.3
N.D.
N.D.
temperature
LB 23C
-1.0
-1.0
-0.2
N.D.
N.D.
motility
inner cut, R2A soft agar motility assay
+1.1
+0.8
-0.2
N.D.
N.D.
stress
Sisomicin 0.001 mg/ml
+0.9
+1.0
+0.1
N.D.
N.D.
pH
LB, pH10
+1.1
+1.1
-0.1
N.D.
N.D.
stress
Cobalt chloride 0.4 mM
+1.1
+1.0
-0.1
N.D.
N.D.
lb
LB
+1.0
+1.1
+0.1
N.D.
N.D.
lb
LB
+1.1
+1.0
+0.1
N.D.
N.D.
stress
perchlorate 10 mM
+1.1
+1.0
+0.1
N.D.
N.D.
pH
LB, pH10
+1.1
+1.1
+0.1
N.D.
N.D.
stress
Paraquat dichloride 0.01 mg/ml
+1.1
+1.2
+0.2
N.D.
N.D.
stress
Cisplatin 0.0025 mg/ml
+1.1
+1.2
+0.3
N.D.
N.D.
motility
inner cut, R2A soft agar motility assay
+1.4
+1.3
+0.1
N.D.
N.D.
stress
perchlorate 25 mM
+1.5
+1.5
+0.2
N.D.
N.D.
stress
copper (II) chloride 2 mM
+1.6
+1.5
+0.1
N.D.
N.D.
stress
Cisplatin 0.005 mg/ml
+1.5
+1.6
+0.2
N.D.
N.D.
motility
inner cut, R2A soft agar motility assay
+1.9
+1.7
+0.2
N.D.
N.D.
stress
D-Cycloserine 0.05 mg/ml
+4.8
+4.9
+0.1
N.D.
N.D.
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