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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_1671 and Ac3H11_1672 overlap by 4 nucleotides
Ac3H11_1672 and Ac3H11_1673 are separated by 119 nucleotides
Ac3H11_1673 and Ac3H11_1674 are separated by 76 nucleotides
Ac3H11_1674 and Ac3H11_1675 are separated by 146 nucleotides
Ac3H11_1671 - Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12), at 271,751 to 274,126
_1671
Ac3H11_1672 - FIG002337: predicted inner membrane protein, at 274,123 to 275,703
_1672
Ac3H11_1673 - MFS transporter, at 275,823 to 277,055
_1673
Ac3H11_1674 - GGDEF family protein, at 277,132 to 278,604
_1674
Ac3H11_1675 - ATP-dependent RNA helicase NGO0650, at 278,751 to 280,616
_1675
Group
Condition
Ac3H11
_1671
Ac3H11
_1672
Ac3H11
_1673
Ac3H11
_1674
Ac3H11
_1675
nitrogen source
L-Alanine (N)
+0.1
+0.5
+0.2
+0.1
-2.8
phage
phage 93.2
+0.5
+0.3
-0.3
+0.1
-1.3
phage
phage 93.1
+0.5
+0.5
-0.0
+0.4
-1.9
stress
perchlorate 10 mM
+0.7
+0.6
+0.1
-0.1
-1.5
stress
Chlorate 20 mM
+0.8
+0.9
-0.1
-0.0
-1.5
stress
Polymyxin B sulfate 0.0001 mg/ml
+1.4
+1.5
-0.2
+0.1
-1.2
stress
Zinc 1 mM
+1.2
+1.1
+0.1
+0.2
-1.0
stress
copper (II) chloride 1 mM
+1.4
+1.3
+0.2
+0.1
-0.9
stress
Bacitracin 0.032 mg/ml
+1.3
+1.2
-0.0
+0.1
-0.2
lb
LB
+1.5
+1.5
-0.1
+0.3
-0.6
stress
copper (II) chloride 2 mM
-0.0
+0.0
+0.1
+0.2
+2.2
stress
syringaldehyde 2.5 mM
+1.4
+1.5
+0.1
+0.2
-0.7
stress
Aluminum chloride 2 mM
+1.2
+1.1
-0.1
+0.1
+0.2
stress
copper (II) chloride 1 mM
+1.5
+1.5
-0.1
+0.2
-0.5
stress
Phosphomycin 0.06 mg/ml
+1.5
+1.4
+0.3
+0.1
-0.6
stress
Phosphomycin 0.02 mg/ml
+1.2
+1.1
+0.2
+0.1
+0.1
stress
Bacitracin 0.008 mg/ml
+1.2
+1.2
-0.1
+0.2
+0.2
stress
Nickel (II) chloride 0.6 mM
+1.2
+1.0
+0.1
+0.1
+0.5
stress
Sisomicin 0.001 mg/ml
+1.0
+0.8
+0.3
+0.1
+0.5
stress
Cobalt chloride 0.32 mM
+1.3
+1.2
+0.1
-0.0
+0.3
lb
LB
+1.2
+1.1
-0.1
-0.1
+0.7
stress
Paraquat dichloride 0.01 mg/ml
+1.4
+1.1
+0.3
-0.2
+0.2
stress
Cisplatin 0.0025 mg/ml
+1.0
+0.9
+0.1
+0.0
+0.9
stress
Sisomicin 0.0005 mg/ml
+1.3
+1.5
-0.0
+0.2
+0.1
stress
Bacitracin 0.016 mg/ml
+1.2
+1.3
-0.1
+0.1
+0.8
stress
Chlorite 0.1 mM
+1.2
+1.1
-0.1
+0.1
+1.0
stress
Cobalt chloride 0.32 mM
+1.5
+1.6
-0.0
+0.2
+0.1
lb
LB
+1.6
+1.6
+0.1
+0.4
-0.2
stress
Nickel (II) chloride 0.6 mM
+2.0
+2.0
-0.1
+0.3
-0.1
stress
Cobalt chloride 0.16 mM
+1.7
+1.8
-0.0
+0.3
+0.7
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