Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1623 and Ac3H11_1624 are separated by 219 nucleotidesAc3H11_1624 and Ac3H11_1625 are separated by 84 nucleotidesAc3H11_1625 and Ac3H11_1626 overlap by 11 nucleotidesAc3H11_1626 and Ac3H11_1627 are separated by 40 nucleotides Ac3H11_1623 - L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data), at 205,621 to 206,793 _1623 Ac3H11_1624 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 207,013 to 209,295 _1624 Ac3H11_1625 - Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-), at 209,380 to 211,749 _1625 Ac3H11_1626 - hypothetical protein, at 211,739 to 212,047 _1626 Ac3H11_1627 - hypothetical protein, at 212,088 to 212,468 _1627
Group Condition Ac3H11_1623 Ac3H11_1624 Ac3H11_1625 Ac3H11_1626 Ac3H11_1627
carbon source L-Lactate (C) -5.8 +0.1 +0.2 -0.6 +0.1
carbon source L-Lactate (C) -5.4 +0.1 +0.0 +0.2 +0.3
carbon source L-Lactate (C) -4.7 +0.0 +0.0 -0.4 +0.3
carbon source D,L-Lactate (C) -2.2 +0.0 -0.2 -0.1 -0.0
stress Cisplatin 0.005 mg/ml -0.1 -0.0 -0.3 -1.6 -0.1
carbon source D,L-Lactate (C) -2.4 +0.1 +0.0 +0.1 +0.1
carbon source D,L-Lactate (C) -1.8 +0.1 +0.2 -0.2 -0.1
phage phage 93.2 -0.5 +0.3 -0.3 -1.0 -0.1
stress Bacitracin 0.016 mg/ml +0.1 +0.0 -0.3 -1.0 -0.2
carbon source a-Ketoglutaric (C) -0.2 +0.1 +0.3 -1.1 -0.5
stress Dimethyl Sulfoxide 6 vol% -0.4 -0.1 -0.4 -0.5 +0.1
stress copper (II) chloride 2 mM -0.1 -0.1 +0.4 -1.3 +0.1
stress Chlorite 0.1 mM -0.4 -0.2 -0.5 -0.0 +0.4
nitrogen source Ammonium chloride (N) -0.6 +0.2 -0.2 -0.5 +0.4
nitrogen source L-Threonine (N) -0.7 +0.2 -0.0 -0.4 +0.3
carbon source succinate (C) -0.2 +0.1 +0.3 -0.7 +0.3
stress Nickel (II) chloride 0.6 mM -0.1 +0.2 -0.3 -0.4 +0.4
pH LB, pH6 +0.2 +0.2 +0.2 -0.9 +0.1
carbon source succinate (C) -0.4 -0.2 -0.3 +0.9 +0.1
nitrogen source L-Alanine (N) -0.3 -0.1 -0.1 +0.4 +0.5
stress Paraquat dichloride 0.01 mg/ml -0.5 +0.3 +0.1 +0.7 +0.0
nitrogen source Uridine (N) -0.4 +0.6 +0.3 +0.6 -0.0
pH LB, pH10 +0.1 -0.1 +0.3 +0.6 +0.3
stress Cobalt chloride 0.16 mM +0.5 +0.3 -0.1 +0.5 -0.0
nitrogen source D-Alanine (N) -0.2 +0.4 +0.5 +0.2 +0.3
carbon source a-Ketoglutaric (C) -0.1 +0.1 +0.4 +0.8 +0.3
motility inner cut, R2A soft agar motility assay -0.2 +1.7 -0.4 +0.4 +0.1
carbon source D-Ribose (C) +0.4 +0.1 +0.2 +0.7 +0.2
motility inner cut, R2A soft agar motility assay -0.2 +2.4 -0.2 -0.1 +0.3
motility inner cut, R2A soft agar motility assay +0.3 +2.7 -0.6 +1.2 +0.2
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