Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1555 and Ac3H11_1556 overlap by 4 nucleotidesAc3H11_1556 and Ac3H11_1557 are separated by 13 nucleotidesAc3H11_1557 and Ac3H11_1558 are separated by 120 nucleotidesAc3H11_1558 and Ac3H11_1559 are separated by 79 nucleotides Ac3H11_1555 - Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-), at 138,348 to 138,905 _1555 Ac3H11_1556 - HpcH/HpaI aldolase, at 138,902 to 139,708 _1556 Ac3H11_1557 - Proposed peptidoglycan lipid II flippase MurJ, at 139,722 to 141,254 _1557 Ac3H11_1558 - Lysyl-tRNA synthetase (class II) (EC 6.1.1.6), at 141,375 to 142,919 _1558 Ac3H11_1559 - Response regulator, at 142,999 to 144,033 _1559
Group Condition Ac3H11_1555 Ac3H11_1556 Ac3H11_1557 Ac3H11_1558 Ac3H11_1559
pH LB, pH5 -0.7 -3.3 -1.8 N.D. +0.2
nitrogen source L-Proline (N) +0.1 -3.1 -2.4 N.D. -0.1
pH LB, pH5 -0.7 -2.7 -2.0 N.D. +0.1
stress Nickel (II) chloride 0.8 mM -0.1 -4.5 -0.5 N.D. -0.2
nitrogen source Ammonium chloride (N) -0.0 -2.5 -1.9 N.D. -0.8
nitrogen source L-Alanine (N) -0.1 -3.8 -0.7 N.D. -0.3
stress Phosphomycin 0.06 mg/ml +0.1 -4.3 -0.8 N.D. +0.7
stress Phosphomycin 0.02 mg/ml -0.2 -3.7 -0.7 N.D. +0.5
carbon source D-Gluconic Acid (C) -1.6 -4.1 +2.4 N.D. -0.3
nitrogen source L-Isoleucine (N) -0.2 -2.3 -0.7 N.D. -0.4
carbon source Tween 20 (C) +0.3 -3.3 -0.5 N.D. -0.0
stress Fusidic 0.001 mg/ml -0.3 -1.3 -1.5 N.D. +0.1
nitrogen source L-Leucine (N) -0.1 -1.8 -0.9 N.D. -0.2
carbon source D-Ribose (C) -0.1 -3.0 +0.4 N.D. -0.2
carbon source D-Glucose (C) -0.3 -1.6 -0.9 N.D. +0.1
carbon source D-Mannose (C) +0.1 -1.5 -1.3 N.D. +0.1
carbon source a-Ketoglutaric (C) -0.9 -1.4 +0.3 N.D. -0.6
nitrogen source L-Threonine (N) +0.2 -1.8 -0.6 N.D. -0.4
carbon source D-Gluconic Acid (C) -1.6 -2.1 +2.0 N.D. -0.2
stress nitrate 45 mM +0.3 -2.3 +0.4 N.D. -0.2
motility inner cut, R2A soft agar motility assay +0.5 -1.9 +0.5 N.D. -0.1
carbon source L-Malic (C) -0.5 -1.7 +1.1 N.D. +0.3
stress Bacitracin 0.032 mg/ml -0.2 +0.6 -1.8 N.D. +0.6
stress copper (II) chloride 1 mM +0.4 -0.6 -0.8 N.D. +1.2
stress Sisomicin 0.0005 mg/ml +0.3 -0.6 -0.8 N.D. +1.2
stress Cobalt chloride 0.16 mM +0.9 +0.1 -1.4 N.D. +1.3
stress Nickel (II) chloride 0.6 mM +0.3 -0.8 -0.4 N.D. +1.9
stress Polymyxin B sulfate 0.0001 mg/ml +0.4 +0.6 -2.0 N.D. +2.1
lb LB +0.5 +0.3 -1.1 N.D. +2.4
lb LB +0.8 +0.3 -0.7 N.D. +2.4
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