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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_1531 and Ac3H11_1532 are separated by 53 nucleotides
Ac3H11_1532 and Ac3H11_1533 overlap by 4 nucleotides
Ac3H11_1533 and Ac3H11_1534 overlap by 23 nucleotides
Ac3H11_1534 and Ac3H11_1535 overlap by 4 nucleotides
Ac3H11_1531 - Translation initiation factor 2, at 107,460 to 110,045
_1531
Ac3H11_1532 - tRNA pseudouridine synthase A (EC 4.2.1.70), at 110,099 to 110,920
_1532
Ac3H11_1533 - Phosphoribosylanthranilate isomerase (EC 5.3.1.24), at 110,917 to 111,678
_1533
Ac3H11_1534 - Tryptophan synthase beta chain (EC 4.2.1.20), at 111,656 to 112,933
_1534
Ac3H11_1535 - Tryptophan synthase alpha chain (EC 4.2.1.20), at 112,930 to 113,739
_1535
Group
Condition
Ac3H11
_1531
Ac3H11
_1532
Ac3H11
_1533
Ac3H11
_1534
Ac3H11
_1535
carbon source
D-Glucose (C)
-0.4
-0.8
-5.5
-4.7
-6.1
carbon source
D-Glucose (C)
-0.5
-0.8
-5.1
-5.0
-5.8
nitrogen source
L-Glutamine (N)
-0.5
-0.8
-5.8
-4.6
-5.1
carbon source
propionate (C)
-0.5
-0.4
-5.6
-4.8
-5.6
nitrogen source
L-Histidine (N)
-0.6
-0.8
-5.8
-4.4
-5.2
carbon source
D-Ribose (C)
-0.4
+0.0
-5.5
-5.3
-5.5
nitrogen source
L-Leucine (N)
-0.2
-0.6
-6.0
-4.9
-5.0
nitrogen source
L-Proline (N)
-0.3
-0.5
-5.8
-4.9
-5.2
carbon source
D-Fructose (C)
-0.3
-0.3
-4.9
-5.3
-5.9
nitrogen source
Uridine (N)
-0.6
-0.7
-5.6
-4.7
-4.9
nitrogen source
L-Threonine (N)
-0.1
-0.9
-5.6
-4.9
-5.1
carbon source
L-Arabinose (C)
+0.0
-0.5
-5.6
-5.1
-5.2
carbon source
pyruvate (C)
-0.3
+0.1
-5.7
-4.8
-5.7
carbon source
D-Ribose (C)
-0.3
+0.1
-5.8
-5.1
-5.3
carbon source
D-Lactate (C)
-0.4
-0.0
-5.1
-4.8
-5.8
nitrogen source
L-Phenylalanine (N)
-0.4
-0.5
-5.3
-4.7
-5.2
carbon source
D,L-Lactate (C)
-0.3
-0.0
-5.5
-4.7
-5.5
carbon source
D-Galactose (C)
-0.1
-0.4
-5.5
-4.7
-5.4
carbon source
D-Galactose (C)
-0.1
-0.3
-4.9
-5.0
-5.6
carbon source
D,L-Lactate (C)
-0.0
-0.2
-5.2
-4.8
-5.5
carbon source
L-Arabinose (C)
-0.1
-0.4
-4.5
-4.8
-5.9
nitrogen source
L-Isoleucine (N)
-0.7
-0.6
-5.9
-4.1
-4.4
carbon source
D-Lactate (C)
-0.3
-0.1
-5.2
-4.8
-5.2
carbon source
L-Lactate (C)
-0.1
-0.1
-5.1
-4.7
-5.5
carbon source
D-Fructose (C)
-0.2
-0.3
-4.6
-5.1
-5.2
carbon source
pyruvate (C)
-0.2
+0.2
-4.8
-4.9
-5.6
carbon source
D-Gluconic Acid (C)
-1.1
+0.2
-4.4
-4.9
-4.9
carbon source
succinate (C)
-0.2
+0.4
-5.4
-4.5
-5.3
carbon source
L-Lactate (C)
-0.1
-0.1
-4.3
-5.0
-5.5
carbon source
succinate (C)
-0.0
+0.4
-5.4
-4.7
-4.5
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