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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_1421 and Ac3H11_1422 are separated by 58 nucleotides
Ac3H11_1422 and Ac3H11_1423 are separated by 199 nucleotides
Ac3H11_1423 and Ac3H11_1424 are separated by 30 nucleotides
Ac3H11_1424 and Ac3H11_1425 are separated by 33 nucleotides
Ac3H11_1421 - Signal transduction histidine kinase CheA (EC 2.7.3.-), at 107,879 to 110,014
_1421
Ac3H11_1422 - Positive regulator of CheA protein activity (CheW), at 110,073 to 110,561
_1422
Ac3H11_1423 - Chemotaxis protein methyltransferase CheR (EC 2.1.1.80), at 110,761 to 111,573
_1423
Ac3H11_1424 - Chemotaxis protein CheD, at 111,604 to 112,350
_1424
Ac3H11_1425 - Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61), at 112,384 to 113,460
_1425
Group
Condition
Ac3H11
_1421
Ac3H11
_1422
Ac3H11
_1423
Ac3H11
_1424
Ac3H11
_1425
nitrogen source
Ammonium chloride (N)
-0.4
-0.6
-0.3
-0.3
-1.6
phage
phage 93.2
+0.3
+0.4
+0.3
+0.0
-1.3
nitrogen source
L-Proline (N)
+0.3
+0.4
+0.4
+0.1
-1.5
carbon source
D-Fructose (C)
+0.4
+0.2
+0.2
+0.3
-1.0
carbon source
L-Asparagine (C)
+0.4
+0.4
+0.3
+0.3
-0.9
nitrogen source
L-Arginine (N)
+0.6
+0.3
+0.5
+0.4
-1.2
carbon source
L-Lactate (C)
+0.4
+0.4
+0.5
+0.3
-1.0
stress
Paraquat dichloride 0.01 mg/ml
+0.6
-0.0
+0.8
+0.4
-0.6
nitrogen source
L-Histidine (N)
+0.9
+1.0
+1.0
+0.4
-1.9
stress
Cobalt chloride 0.32 mM
+0.6
+0.3
+0.6
+0.5
-0.4
lb
LB
+0.5
+0.6
+0.4
+0.3
-0.4
stress
Aluminum chloride 2 mM
+0.7
+0.5
+0.5
+0.4
-0.5
stress
nitrite 10 mM
+0.6
+0.6
+0.6
+0.3
-0.3
stress
Phosphomycin 0.02 mg/ml
+0.8
+0.6
+0.5
+0.5
-0.4
stress
Chlorite 0.1 mM
+0.6
+0.4
+0.7
+0.4
-0.2
lb
LB
+0.6
+0.5
+0.6
+0.6
-0.2
temperature
LB 23C
+0.7
+0.7
+0.6
+0.4
-0.4
stress
Bacitracin 0.032 mg/ml
+0.7
+0.5
+0.9
+0.2
-0.2
stress
Bacitracin 0.016 mg/ml
+0.8
+0.8
+0.6
+0.3
-0.2
stress
Chlorate 20 mM
+0.8
+0.6
+0.5
+0.5
-0.0
stress
syringaldehyde 2.5 mM
+1.0
+0.8
+0.9
+0.4
-0.4
stress
Phosphomycin 0.06 mg/ml
+1.0
+0.8
+0.8
+0.5
-0.3
stress
Cobalt chloride 0.32 mM
+1.6
+1.4
+1.3
+0.9
-0.9
stress
copper (II) chloride 1 mM
+1.6
+1.2
+1.2
+1.0
-0.6
stress
Sisomicin 0.0005 mg/ml
+1.9
+1.5
+1.6
+1.0
-0.9
stress
Cobalt chloride 0.16 mM
+2.2
+1.8
+2.0
+1.3
-1.0
stress
Nickel (II) chloride 0.6 mM
+2.7
+2.1
+2.2
+1.7
-0.8
stress
Polymyxin B sulfate 0.0001 mg/ml
+2.8
+2.4
+2.8
+1.7
-0.7
lb
LB
+3.1
+2.7
+2.6
+1.8
-0.7
lb
LB
+3.2
+2.9
+2.9
+2.0
-0.8
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