Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1379 and Ac3H11_1380 are separated by 41 nucleotidesAc3H11_1380 and Ac3H11_1381 are separated by 77 nucleotidesAc3H11_1381 and Ac3H11_1382 are separated by 27 nucleotidesAc3H11_1382 and Ac3H11_1383 overlap by 8 nucleotides Ac3H11_1379 - Negative regulator of flagellin synthesis, at 68,343 to 68,666 _1379 Ac3H11_1380 - hypothetical protein, at 68,708 to 69,082 _1380 Ac3H11_1381 - RNA polymerase sigma factor for flagellar operon, at 69,160 to 69,876 _1381 Ac3H11_1382 - FIG00538194: hypothetical protein, at 69,904 to 70,701 _1382 Ac3H11_1383 - Flagellar biosynthesis protein FlhF, at 70,694 to 72,217 _1383
Group Condition Ac3H11_1379 Ac3H11_1380 Ac3H11_1381 Ac3H11_1382 Ac3H11_1383
lb LB N.D. -1.6 +0.1 -0.4 -0.1
nitrogen source D-Alanine (N) N.D. -0.6 -0.7 -0.3 -0.3
lb LB N.D. -1.0 -0.4 -0.5 +0.3
stress Phosphomycin 0.02 mg/ml N.D. -1.1 +0.1 -0.5 -0.1
nitrogen source L-Glutamine (N) N.D. -0.8 -0.7 -0.0 -0.0
carbon source L-Arabinose (C) N.D. -1.1 -0.5 -0.1 +0.2
stress Aluminum chloride 2 mM N.D. -0.6 -0.2 -0.6 +0.1
stress Paraquat dichloride 0.01 mg/ml N.D. -0.9 +0.2 -0.5 -0.1
lb LB N.D. -1.0 -0.3 +0.3 -0.2
motility inner cut, R2A soft agar motility assay N.D. -1.5 -0.1 +0.4 +0.1
nitrogen source L-Arginine (N) N.D. -0.4 -0.5 -0.5 +0.4
stress Cisplatin 0.0025 mg/ml N.D. -0.6 +0.3 -0.1 -0.5
carbon source Tween 20 (C) N.D. -0.4 -0.3 -0.5 +0.2
nitrogen source L-Isoleucine (N) N.D. -0.3 -0.9 +0.1 +0.3
stress Fusidic 0.001 mg/ml N.D. -0.8 -0.1 +0.4 -0.0
carbon source D-Galactose (C) N.D. +0.0 -0.5 -0.3 +0.5
nitrogen source L-Proline (N) N.D. +0.5 -0.7 -0.1 +0.2
carbon source D-Glucose (C) N.D. +0.3 -0.5 -0.2 +0.4
nitrogen source Ammonium chloride (N) N.D. +0.6 -1.1 -0.5 +1.1
carbon source succinate (C) N.D. +0.1 -0.3 -0.2 +0.6
nitrogen source Uridine (N) N.D. -0.1 -1.2 -0.0 +1.5
stress Sisomicin 0.001 mg/ml N.D. -0.6 +0.4 +0.4 +0.0
nitrogen source L-Alanine (N) N.D. -0.6 +0.1 -0.0 +0.7
stress syringaldehyde 2.5 mM N.D. +0.5 -0.7 +0.3 +0.1
carbon source succinate (C) N.D. +0.5 +0.3 -0.3 -0.1
phage phage 93.1 N.D. -0.2 -0.4 +0.0 +1.1
carbon source a-Ketoglutaric (C) N.D. +0.3 -0.4 +0.4 +0.4
phage phage 93.1 N.D. -0.5 -0.2 +0.1 +1.3
phage phage 93.2 N.D. +0.3 -0.4 +0.2 +1.0
carbon source D-Lactate (C) N.D. +1.0 -0.0 -0.1 +0.3
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