Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1258 and Ac3H11_1259 are separated by 254 nucleotidesAc3H11_1259 and Ac3H11_1260 are separated by 24 nucleotidesAc3H11_1260 and Ac3H11_1261 are separated by 203 nucleotidesAc3H11_1261 and Ac3H11_1262 are separated by 53 nucleotides Ac3H11_1258 - Tricarboxylate transport protein TctC, at 76,463 to 77,428 _1258 Ac3H11_1259 - N-formylglutamate deformylase (EC 3.5.1.68), at 77,683 to 78,615 _1259 Ac3H11_1260 - Beta-lactamase class C family protein, at 78,640 to 79,749 _1260 Ac3H11_1261 - Sensory histidine kinase QseC, at 79,953 to 81,308 _1261 Ac3H11_1262 - probable two-component system response regulator, at 81,362 to 82,018 _1262
Group Condition Ac3H11_1258 Ac3H11_1259 Ac3H11_1260 Ac3H11_1261 Ac3H11_1262
lb LB -0.5 +0.1 +0.2 -0.5 -1.0
stress Cobalt chloride 0.32 mM +0.0 -0.2 +0.0 +0.1 -1.4
carbon source a-Ketoglutaric (C) +0.3 -0.1 +0.3 -0.8 -1.2
carbon source D-Ribose (C) +0.3 -0.2 +0.1 -0.8 -0.6
carbon source D-Gluconic Acid (C) +0.3 -0.2 +0.1 -0.5 -1.0
carbon source pyruvate (C) -0.0 -0.1 +0.1 -0.4 -0.7
carbon source a-Ketoglutaric (C) +0.1 -0.1 -0.2 -0.9 -0.1
carbon source D-Fructose (C) +0.0 +0.1 +0.1 -1.0 -0.3
stress Phosphomycin 0.02 mg/ml -0.2 +0.0 -0.0 +0.2 -1.0
stress Bacitracin 0.008 mg/ml -0.1 +0.0 -0.2 -0.8 +0.2
stress Sisomicin 0.0005 mg/ml -0.0 +0.1 +0.0 +0.4 -1.0
carbon source D-Galactose (C) +0.2 +0.0 -0.1 +0.3 -0.9
carbon source L-Lactate (C) -0.0 +0.2 +0.3 -0.4 -0.4
stress Phosphomycin 0.06 mg/ml -0.3 +0.2 -0.2 +0.5 -0.4
nitrogen source L-Arginine (N) -0.0 +0.2 +0.1 -0.6 +0.7
nitrogen source D-Alanine (N) -0.2 +0.3 +0.2 -0.3 +0.4
stress Paraquat dichloride 0.01 mg/ml -0.2 +0.3 -0.2 +0.8 -0.1
stress Nickel (II) chloride 0.8 mM +0.1 -0.1 -0.4 +0.9 +0.2
pH LB, pH6 +0.1 -0.1 +0.2 -0.2 +0.8
stress nitrite 10 mM -0.1 +0.0 +0.1 +0.6 +0.5
nitrogen source L-tyrosine (N) -0.1 +0.0 +0.1 +0.5 +0.7
stress D-Cycloserine 0.05 mg/ml +0.3 -0.3 +0.3 +0.9 -0.1
stress perchlorate 25 mM +0.0 +0.1 -0.2 +0.8 +0.6
nitrogen source L-Alanine (N) +0.1 +0.3 -0.4 -0.2 +1.5
stress Tetracycline 0.00005 mg/ml +0.0 -0.1 -0.1 +0.9 +0.6
stress Thallium(I) acetate 0.0006 mg/ml +0.1 +0.1 +0.0 +0.5 +0.9
stress perchlorate 10 mM -0.2 +0.1 +0.0 +1.0 +0.9
pH LB, pH10 +0.1 +0.0 +0.5 +0.3 +1.1
nitrogen source Ammonium chloride (N) +0.0 +0.2 +0.1 +0.5 +1.8
motility inner cut, R2A soft agar motility assay +0.6 +0.2 -0.0 +1.3 +0.7
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