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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_1228 and Ac3H11_1229 are separated by 23 nucleotides
Ac3H11_1229 and Ac3H11_1230 are separated by 179 nucleotides
Ac3H11_1230 and Ac3H11_1231 are separated by 68 nucleotides
Ac3H11_1231 and Ac3H11_1232 are separated by 80 nucleotides
Ac3H11_1228 - TRAP-type C4-dicarboxylate transport system, large permease component, at 45,998 to 47,278
_1228
Ac3H11_1229 - TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter, at 47,302 to 47,889
_1229
Ac3H11_1230 - Transcriptional regulator, TetR family, at 48,069 to 48,785
_1230
Ac3H11_1231 - Glutathione S-transferase family protein, at 48,854 to 49,468
_1231
Ac3H11_1232 - Adenylosuccinate lyase (EC 4.3.2.2), at 49,549 to 50,967
_1232
Group
Condition
Ac3H11
_1228
Ac3H11
_1229
Ac3H11
_1230
Ac3H11
_1231
Ac3H11
_1232
nitrogen source
L-Phenylalanine (N)
-0.1
-0.3
-3.8
-0.3
N.D.
stress
Chlorite 0.1 mM
-0.2
-0.3
-0.3
-1.1
N.D.
stress
Tetracycline 0.0001 mg/ml
-0.0
-0.0
-0.1
-1.2
N.D.
lb
LB
-0.3
+0.0
+0.1
-1.1
N.D.
nitrogen source
L-Leucine (N)
+0.3
-0.4
-1.2
+0.1
N.D.
nitrogen source
Uridine (N)
+0.3
-0.2
-0.4
-0.7
N.D.
stress
perchlorate 10 mM
+0.4
-0.3
-0.1
-0.9
N.D.
carbon source
D-Glucose (C)
+0.1
-0.0
-1.2
+0.2
N.D.
carbon source
D-Gluconic Acid (C)
-0.2
-0.2
-1.6
+1.1
N.D.
nitrogen source
L-Histidine (N)
+0.0
-0.2
-0.9
+0.3
N.D.
carbon source
D-Ribose (C)
-0.2
+0.0
-0.8
+0.5
N.D.
stress
Dimethyl Sulfoxide 6 vol%
-0.5
+0.3
+0.2
-0.4
N.D.
carbon source
D-Glucose (C)
-0.0
-0.2
-1.2
+0.8
N.D.
carbon source
a-Ketoglutaric (C)
-0.3
-0.0
-0.8
+0.7
N.D.
phage
phage 93.2
-0.7
-0.3
+1.1
-0.5
N.D.
carbon source
pyruvate (C)
+0.2
-0.1
-1.1
+0.8
N.D.
carbon source
succinate (C)
+0.4
-0.3
-0.4
+0.3
N.D.
carbon source
pyruvate (C)
+0.2
-0.0
-1.1
+1.0
N.D.
carbon source
L-Lactate (C)
+0.1
-0.2
-0.4
+0.7
N.D.
stress
Cobalt chloride 0.4 mM
-0.4
+0.2
+0.2
+0.5
N.D.
carbon source
D-Gluconic Acid (C)
+0.2
-0.1
-0.9
+1.4
N.D.
carbon source
propionate (C)
-0.2
-0.1
+0.2
+0.8
N.D.
carbon source
L-Malic (C)
+0.1
+0.2
-0.3
+0.9
N.D.
carbon source
succinate (C)
+0.0
+0.4
-0.1
+0.7
N.D.
nitrogen source
Ammonium chloride (N)
+0.4
+0.0
-0.9
+1.6
N.D.
carbon source
succinate (C)
+0.3
+0.2
-0.3
+1.0
N.D.
phage
phage 93.1
+0.0
+0.2
+1.5
-0.6
N.D.
stress
copper (II) chloride 2 mM
+0.5
+0.8
+0.3
-0.3
N.D.
carbon source
a-Ketoglutaric (C)
+0.3
+0.4
-0.6
+1.1
N.D.
phage
phage 93.1
+0.2
+0.1
+1.9
-0.0
N.D.
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