Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1208 and Ac3H11_1209 are separated by 89 nucleotidesAc3H11_1209 and Ac3H11_1210 are separated by 118 nucleotidesAc3H11_1210 and Ac3H11_1211 overlap by 4 nucleotidesAc3H11_1211 and Ac3H11_1212 are separated by 72 nucleotides Ac3H11_1208 - FIG005080: Possible exported protein, at 18,872 to 23,020 _1208 Ac3H11_1209 - Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42), at 23,110 to 25,875 _1209 Ac3H11_1210 - transcriptional regulator, TetR family, at 25,994 to 26,725 _1210 Ac3H11_1211 - Outer membrane protein assembly factor YaeT precursor, at 26,722 to 28,170 _1211 Ac3H11_1212 - Secretion protein HlyD precursor, at 28,243 to 29,454 _1212
Group Condition Ac3H11_1208 Ac3H11_1209 Ac3H11_1210 Ac3H11_1211 Ac3H11_1212
stress Bacitracin 0.032 mg/ml -1.0 -1.9 -1.6 -0.5 +0.1
pH LB, pH10 -2.8 -0.8 -0.7 -0.1 +0.6
pH LB, pH10 -2.6 -0.5 -0.6 -0.1 +0.1
stress Cobalt chloride 0.4 mM -1.8 -0.7 -0.5 -0.7 +0.1
stress Cobalt chloride 0.32 mM -2.5 -0.2 -0.5 +0.2 +0.0
carbon source Tween 20 (C) +0.3 -0.2 -0.2 -1.4 -1.7
nitrogen source L-tyrosine (N) -3.1 +0.4 -0.0 -0.1 +0.1
motility inner cut, R2A soft agar motility assay -1.5 -1.7 -0.2 +0.4 +0.6
lb LB +1.5 -2.0 -0.4 -0.6 -0.4
stress Paraquat dichloride 0.01 mg/ml +1.9 -1.9 -0.7 -0.7 -0.4
stress Zinc 1 mM +1.1 -1.3 -0.6 -0.7 -0.2
stress Chlorite 0.1 mM +1.7 -2.4 +0.0 -0.5 -0.2
stress perchlorate 10 mM +1.5 -1.0 -0.5 -0.6 -0.6
stress Fusidic 0.001 mg/ml +1.6 -1.9 -0.8 -0.0 -0.0
stress Bacitracin 0.008 mg/ml +0.8 -2.0 -0.3 +0.4 +0.2
lb LB +1.7 -1.5 +0.0 -0.9 -0.1
lb LB +1.7 -1.4 -0.1 -0.5 -0.5
stress Phosphomycin 0.06 mg/ml +1.7 -1.2 -0.3 -0.8 +0.0
stress Nickel (II) chloride 0.6 mM +2.1 -2.0 +0.2 -0.3 -0.5
stress Phosphomycin 0.02 mg/ml +1.6 -1.3 -0.3 -0.4 -0.1
stress Sisomicin 0.001 mg/ml +1.6 -1.5 +0.0 -0.3 -0.3
stress Cisplatin 0.0025 mg/ml +1.7 -1.5 +0.0 +0.1 -0.6
stress copper (II) chloride 1 mM +1.8 -1.2 -0.2 -0.7 -0.0
stress Cobalt chloride 0.32 mM +1.8 -0.9 -0.2 -0.6 -0.1
stress Aluminum chloride 2 mM +1.6 -1.2 -0.4 +0.2 -0.2
carbon source pyruvate (C) +2.0 +0.1 -0.8 -1.0 -0.1
carbon source D-Gluconic Acid (C) +3.0 -0.2 -0.3 -1.2 -0.4
carbon source D-Gluconic Acid (C) +3.2 -0.5 -0.6 -0.5 -0.1
carbon source a-Ketoglutaric (C) +3.5 -0.2 +0.2 -0.4 -0.4
carbon source a-Ketoglutaric (C) +3.0 -0.5 +0.1 +0.0 +0.2
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