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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_1091 and Ac3H11_1092 are separated by 52 nucleotides
Ac3H11_1092 and Ac3H11_1093 are separated by 13 nucleotides
Ac3H11_1093 and Ac3H11_1094 overlap by 4 nucleotides
Ac3H11_1094 and Ac3H11_1095 are separated by 3 nucleotides
Ac3H11_1091 - GNAT family acetyltransferase PA5433, at 25,931 to 26,737
_1091
Ac3H11_1092 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 26,790 to 28,286
_1092
Ac3H11_1093 - Acetylornithine deacetylase (EC 3.5.1.16), at 28,300 to 29,535
_1093
Ac3H11_1094 - N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87), at 29,532 to 31,310
_1094
Ac3H11_1095 - Uricase (urate oxidase) (EC 1.7.3.3), at 31,314 to 32,273
_1095
Group
Condition
Ac3H11
_1091
Ac3H11
_1092
Ac3H11
_1093
Ac3H11
_1094
Ac3H11
_1095
stress
Chlorite 0.1 mM
-0.1
-0.2
-2.4
-0.2
+0.0
lb
LB
-0.3
+0.0
-2.7
-0.2
+0.3
stress
Zinc 1 mM
+0.1
+0.2
-2.7
-0.1
-0.4
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.1
+0.1
-2.2
-0.0
-0.1
stress
Cobalt chloride 0.32 mM
+0.0
+0.1
-2.3
-0.1
-0.0
stress
Cobalt chloride 0.32 mM
+0.2
-0.2
-1.9
-0.1
-0.2
lb
LB
-0.1
-0.1
-2.1
-0.1
+0.1
stress
nitrate 100 mM
-0.1
-0.1
-1.8
-0.2
-0.1
carbon source
D-Gluconic Acid (C)
-0.1
-0.1
-2.4
-0.0
+0.3
stress
Paraquat dichloride 0.01 mg/ml
+0.0
-0.0
-2.1
-0.2
+0.1
stress
copper (II) chloride 1 mM
-0.2
+0.2
-2.1
-0.1
-0.0
stress
sodium fluoride 20 mM
+0.1
-0.2
-1.7
-0.3
-0.1
stress
Fusidic 0.001 mg/ml
-0.2
-0.2
-1.8
-0.1
+0.1
lb
LB
+0.2
-0.2
-2.3
-0.2
+0.4
carbon source
D-Gluconic Acid (C)
-0.3
-0.2
-1.7
-0.0
+0.2
stress
Cobalt chloride 0.4 mM
+0.3
+0.4
-2.6
+0.1
-0.1
stress
Bacitracin 0.008 mg/ml
-0.2
+0.2
-1.7
+0.1
-0.3
lb
LB
-0.2
-0.1
-1.8
+0.1
+0.1
stress
Sisomicin 0.001 mg/ml
+0.2
+0.3
-2.2
-0.3
+0.0
stress
Cobalt chloride 0.16 mM
-0.0
+0.0
-1.9
-0.1
+0.2
nitrogen source
L-Alanine (N)
-0.4
-0.2
-1.4
+0.4
-0.1
stress
A22 0.025 mg/ml
+0.2
+0.1
-2.1
+0.2
-0.0
stress
Bacitracin 0.016 mg/ml
+0.0
+0.1
-2.1
+0.4
-0.1
stress
Chlorate 20 mM
+0.1
+0.1
-2.0
+0.0
+0.3
stress
2-Furfuraldehyde 0.06 vol%
+0.5
+0.1
-1.6
-0.2
-0.4
stress
Cisplatin 0.005 mg/ml
+0.2
+0.7
-1.6
-0.4
+0.1
nitrogen source
L-Glutamine (N)
+0.2
+0.3
-1.7
+0.0
+0.1
nitrogen source
D-Alanine (N)
+0.7
-0.0
-1.8
+0.3
-0.0
nitrogen source
Ammonium chloride (N)
+1.3
+0.1
-1.3
-0.4
-0.1
stress
D-Cycloserine 0.05 mg/ml
-0.4
-0.7
+7.0
+0.2
+0.2
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