Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1078 and Ac3H11_1079 are separated by 80 nucleotidesAc3H11_1079 and Ac3H11_1080 are separated by 27 nucleotidesAc3H11_1080 and Ac3H11_1081 overlap by 4 nucleotidesAc3H11_1081 and Ac3H11_1082 are separated by 200 nucleotides Ac3H11_1078 - hypothetical protein, at 9,560 to 10,378 _1078 Ac3H11_1079 - NADP-dependent malic enzyme (EC 1.1.1.40), at 10,459 to 12,765 _1079 Ac3H11_1080 - hypothetical protein, at 12,793 to 12,948 _1080 Ac3H11_1081 - Xanthine-uracil permease, at 12,945 to 14,432 _1081 Ac3H11_1082 - predicted biotin regulatory protein BioR (GntR family), at 14,633 to 15,319 _1082
Group Condition Ac3H11_1078 Ac3H11_1079 Ac3H11_1080 Ac3H11_1081 Ac3H11_1082
nitrogen source D-Alanine (N) N.D. -0.3 -5.5 -0.5 +0.3
carbon source L-Glutamine (C) N.D. -1.4 -0.2 -0.3 -0.1
nitrogen source L-Isoleucine (N) N.D. -0.1 -2.8 +0.5 +0.5
stress Cisplatin 0.0025 mg/ml N.D. +0.6 -2.2 +0.4 -0.5
stress Cobalt chloride 0.32 mM N.D. +0.3 -1.3 -0.3 -0.3
stress Cisplatin 0.005 mg/ml N.D. +0.7 -0.1 -0.4 -1.6
stress Cobalt chloride 0.4 mM N.D. +0.2 -0.7 -0.4 -0.5
carbon source a-Ketoglutaric (C) N.D. -0.2 +0.1 -1.5 +0.2
stress D-Cycloserine 0.05 mg/ml N.D. +0.1 -1.4 +0.5 -0.5
stress Cobalt chloride 0.16 mM N.D. +0.4 -0.2 -1.2 +0.1
nitrogen source Ammonium chloride (N) N.D. +0.4 -1.7 -0.8 +1.2
nitrogen source L-Proline (N) N.D. -1.5 +0.8 -0.3 +0.4
stress Paraquat dichloride 0.01 mg/ml N.D. +0.7 +0.3 -0.1 -1.0
stress Fusidic 0.001 mg/ml N.D. +0.7 +0.5 -0.7 -0.3
stress Phosphomycin 0.06 mg/ml N.D. +0.5 +1.2 -0.1 -1.4
stress Chlorite 0.1 mM N.D. +0.6 +0.4 +0.1 -0.9
nitrogen source L-Alanine (N) N.D. -0.4 +0.5 +0.6 -0.4
stress nitrite 10 mM N.D. +0.5 +0.9 -0.4 -0.5
carbon source a-Ketoglutaric (C) N.D. -0.3 +0.6 -0.6 +0.8
stress copper (II) chloride 1 mM N.D. +0.5 +0.9 -0.5 -0.1
stress perchlorate 10 mM N.D. +0.9 +0.4 -0.2 -0.3
stress Bacitracin 0.008 mg/ml N.D. +0.5 +0.9 -0.6 +0.1
pH LB, pH10 N.D. +1.0 +1.0 -1.0 +0.1
lb LB N.D. +0.6 +0.9 -0.6 +0.5
stress copper (II) chloride 2 mM N.D. +0.2 +1.6 -0.6 +0.1
stress Polymyxin B sulfate 0.0001 mg/ml N.D. +0.6 +0.1 -0.2 +1.1
stress A22 0.025 mg/ml N.D. +0.7 +1.4 -0.3 -0.0
carbon source succinate (C) N.D. +0.4 +0.9 +0.3 +0.3
stress Sisomicin 0.001 mg/ml N.D. +0.7 +1.6 -0.3 +0.1
pH LB, pH10 N.D. +1.0 +0.8 +0.5 +0.4
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