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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_1037 and Ac3H11_1038 are separated by 167 nucleotides
Ac3H11_1038 and Ac3H11_1039 are separated by 22 nucleotides
Ac3H11_1039 and Ac3H11_1040 are separated by 66 nucleotides
Ac3H11_1040 and Ac3H11_1041 are separated by 150 nucleotides
Ac3H11_1037 - Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16), at 156,406 to 156,870
_1037
Ac3H11_1038 - suppressor for copper-sensitivity D, putative, at 157,038 to 157,625
_1038
Ac3H11_1039 - Phosphoserine phosphatase (EC 3.1.3.3), at 157,648 to 158,427
_1039
Ac3H11_1040 - hypothetical protein, at 158,494 to 158,688
_1040
Ac3H11_1041 - hypothetical protein, at 158,839 to 159,585
_1041
Group
Condition
Ac3H11
_1037
Ac3H11
_1038
Ac3H11
_1039
Ac3H11
_1040
Ac3H11
_1041
stress
5-Hydroxymethylfurfural 5 mM
N.D.
-0.9
N.D.
N.D.
+0.1
stress
Cisplatin 0.0025 mg/ml
N.D.
-0.3
N.D.
N.D.
-0.4
stress
Cisplatin 0.005 mg/ml
N.D.
+0.1
N.D.
N.D.
-0.7
stress
Phosphomycin 0.06 mg/ml
N.D.
-0.4
N.D.
N.D.
-0.2
motility
inner cut, R2A soft agar motility assay
N.D.
+0.4
N.D.
N.D.
-0.8
stress
sodium fluoride 35 mM
N.D.
-0.6
N.D.
N.D.
+0.2
nitrogen source
L-Leucine (N)
N.D.
-0.6
N.D.
N.D.
+0.3
stress
Cobalt chloride 0.4 mM
N.D.
-0.5
N.D.
N.D.
+0.3
lb
LB
N.D.
-0.4
N.D.
N.D.
+0.2
nitrogen source
L-Alanine (N)
N.D.
-0.4
N.D.
N.D.
+0.4
pH
LB, pH5
N.D.
-0.3
N.D.
N.D.
+0.3
stress
Dimethyl Sulfoxide 6 vol%
N.D.
-0.3
N.D.
N.D.
+0.4
stress
Bacitracin 0.016 mg/ml
N.D.
-0.3
N.D.
N.D.
+0.3
carbon source
D-Lactate (C)
N.D.
-0.3
N.D.
N.D.
+0.4
nitrogen source
Ammonium chloride (N)
N.D.
-0.5
N.D.
N.D.
+0.6
stress
Bacitracin 0.008 mg/ml
N.D.
+0.7
N.D.
N.D.
-0.4
motility
inner cut, R2A soft agar motility assay
N.D.
+0.5
N.D.
N.D.
-0.2
carbon source
L-Lactate (C)
N.D.
+0.5
N.D.
N.D.
-0.1
nitrogen source
D-Alanine (N)
N.D.
-0.2
N.D.
N.D.
+0.7
stress
Fusidic 0.001 mg/ml
N.D.
+0.6
N.D.
N.D.
-0.1
stress
Cephalothin 0.025 mg/ml
N.D.
+0.7
N.D.
N.D.
-0.2
stress
Aluminum chloride 2 mM
N.D.
+0.7
N.D.
N.D.
-0.1
stress
perchlorate 10 mM
N.D.
+0.4
N.D.
N.D.
+0.1
pH
LB, pH10
N.D.
+0.7
N.D.
N.D.
-0.1
stress
Cephalothin 0.01 mg/ml
N.D.
+0.5
N.D.
N.D.
+0.2
lb
LB
N.D.
+0.6
N.D.
N.D.
+0.1
stress
Bacitracin 0.032 mg/ml
N.D.
+0.3
N.D.
N.D.
+0.4
carbon source
a-Ketoglutaric (C)
N.D.
+0.5
N.D.
N.D.
+0.2
nitrogen source
L-Isoleucine (N)
N.D.
+0.6
N.D.
N.D.
+0.2
nitrogen source
L-Glutamine (N)
N.D.
+0.4
N.D.
N.D.
+0.5
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