Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_101 and Ac3H11_102 are separated by 34 nucleotidesAc3H11_102 and Ac3H11_103 are separated by 1 nucleotidesAc3H11_103 and Ac3H11_104 overlap by 1 nucleotidesAc3H11_104 and Ac3H11_105 overlap by 1 nucleotides Ac3H11_101 - Benzoate transport, extracellular ligand-binding receptor, at 104,825 to 105,994 _101 Ac3H11_102 - High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1), at 106,029 to 106,910 _102 Ac3H11_103 - Benzoate transport, inner-membrane translocator precursor, at 106,912 to 107,961 _103 Ac3H11_104 - Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1), at 107,961 to 108,710 _104 Ac3H11_105 - Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1), at 108,710 to 109,414 _105
Group Condition Ac3H11_101 Ac3H11_102 Ac3H11_103 Ac3H11_104 Ac3H11_105
stress Paraquat dichloride 0.01 mg/ml -0.4 -0.0 -0.2 -0.6 -0.5
pH LB, pH10 +0.2 -0.1 -0.4 -1.3 +0.0
nitrogen source D-Alanine (N) +0.0 -0.2 -0.3 -0.9 -0.1
stress copper (II) chloride 1 mM -0.1 -0.4 -0.3 -0.4 -0.3
stress nitrite 10 mM +0.2 -0.8 -0.3 +0.5 -0.5
stress Cisplatin 0.005 mg/ml -0.0 -0.2 -0.1 +0.3 -0.8
stress nitrate 100 mM +0.2 -0.0 -0.3 -0.6 +0.0
stress Cobalt chloride 0.32 mM -0.3 -0.0 +0.2 -0.5 +0.0
motility inner cut, R2A soft agar motility assay -0.7 -0.4 +0.1 +0.5 -0.1
nitrogen source L-Isoleucine (N) -0.3 -0.2 -0.1 +0.4 -0.1
lb LB +0.4 +0.1 -0.4 -0.3 -0.0
lb LB +0.3 +0.1 -0.1 -0.4 +0.2
stress A22 0.025 mg/ml +0.3 +0.2 -0.3 +0.3 -0.1
stress Cisplatin 0.0025 mg/ml -0.3 -0.2 -0.1 +0.8 +0.2
stress sodium fluoride 50 mM +0.2 +0.1 -0.4 +0.3 +0.2
nitrogen source L-Alanine (N) +0.1 -0.2 -0.3 +0.7 +0.2
motility inner cut, R2A soft agar motility assay -0.0 +0.1 +0.1 +0.5 -0.3
lb LB +0.2 +0.1 +0.2 -0.2 +0.2
motility inner cut, R2A soft agar motility assay +0.1 +0.1 +0.6 +0.3 -0.5
carbon source a-Ketoglutaric (C) -0.2 -0.4 +0.0 +1.3 -0.1
carbon source D,L-Lactate (C) +0.0 +0.2 +0.2 +0.5 +0.1
carbon source pyruvate (C) +0.3 +0.2 +0.2 +0.4 +0.0
pH LB, pH10 +0.8 -0.0 -0.2 +0.3 +0.3
carbon source L-Lactate (C) +0.5 +0.3 +0.0 +0.1 +0.2
carbon source D,L-Lactate (C) +0.1 +0.1 +0.5 +0.3 +0.3
nitrogen source Ammonium chloride (N) -0.3 +1.0 -0.3 +0.6 +0.3
stress Polymyxin B sulfate 0.0001 mg/ml +0.3 +0.1 +0.3 +0.4 +0.4
carbon source D-Gluconic Acid (C) -0.1 +0.2 -0.0 +1.1 +0.3
carbon source succinate (C) +0.5 +0.2 +0.2 +0.6 +0.1
carbon source D-Lactate (C) +0.3 +0.4 +0.4 +0.3 +0.4
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