Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_1026 and Ac3H11_1027 are separated by 269 nucleotidesAc3H11_1027 and Ac3H11_1028 overlap by 4 nucleotidesAc3H11_1028 and Ac3H11_1029 are separated by 10 nucleotidesAc3H11_1029 and Ac3H11_1030 are separated by 86 nucleotides Ac3H11_1026 - ATP-dependent RNA helicase RhlE, at 148,010 to 149,302 _1026 Ac3H11_1027 - FIG01198047: hypothetical protein, at 149,572 to 149,982 _1027 Ac3H11_1028 - Translation initiation factor SUI1-related protein, at 149,979 to 150,341 _1028 Ac3H11_1029 - Putative cytoplasmic protein, at 150,352 to 150,579 _1029 Ac3H11_1030 - hypothetical protein, at 150,666 to 150,872 _1030
Group Condition Ac3H11_1026 Ac3H11_1027 Ac3H11_1028 Ac3H11_1029 Ac3H11_1030
pH LB, pH10 +0.0 -2.8 N.D. -1.6 -0.8
stress Cisplatin 0.005 mg/ml +0.1 -4.0 N.D. -1.3 +0.1
nitrogen source Ammonium chloride (N) +0.5 -2.6 N.D. -2.7 -0.1
stress Polymyxin B sulfate 0.0001 mg/ml -0.0 -2.1 N.D. -2.9 +0.1
lb LB -0.2 -1.5 N.D. -2.5 +0.0
stress Cisplatin 0.0025 mg/ml -0.1 -0.9 N.D. -2.5 -0.4
lb LB +0.2 -4.1 N.D. +0.1 +0.1
motility inner cut, R2A soft agar motility assay +0.2 -1.1 N.D. -1.6 -0.5
motility inner cut, R2A soft agar motility assay +0.1 -1.8 N.D. -1.0 -0.3
stress Cobalt chloride 0.4 mM +0.1 -2.1 N.D. -0.7 -0.1
stress Tetracycline 0.0001 mg/ml -0.2 -0.5 N.D. -2.1 -0.0
stress sodium fluoride 20 mM +0.0 -1.4 N.D. -1.3 -0.1
carbon source a-Ketoglutaric (C) +0.0 -0.3 N.D. -2.8 +0.4
stress copper (II) chloride 2 mM +0.2 -0.9 N.D. -1.0 -0.4
lb LB -0.2 -1.3 N.D. -0.7 +0.2
phage phage 93.2 +0.3 -0.3 N.D. -1.9 -0.1
stress Cobalt chloride 0.32 mM +0.1 +0.2 N.D. -1.9 -0.0
stress nitrate 100 mM +0.2 -1.1 N.D. -0.8 +0.2
stress Bacitracin 0.008 mg/ml +0.0 +0.5 N.D. -1.7 +0.2
temperature LB 23C +0.1 -1.2 N.D. +0.7 -0.5
stress Cobalt chloride 0.32 mM +0.1 -1.9 N.D. +0.9 +0.1
carbon source D-Fructose (C) +0.2 +0.9 N.D. -1.5 -0.1
carbon source L-Arabinose (C) +0.2 +1.3 N.D. -1.4 +0.2
carbon source D-Ribose (C) +0.2 -0.6 N.D. +1.6 +0.0
carbon source D-Fructose (C) +0.4 +2.3 N.D. -0.4 -0.2
pH LB, pH10 -0.4 +2.4 N.D. -0.5 +0.6
stress Sisomicin 0.004 mg/ml +0.0 +2.8 N.D. -0.5 -0.2
stress D-Cycloserine 0.05 mg/ml +0.0 -1.0 N.D. +3.3 -0.1
carbon source D-Lactate (C) +0.3 +1.3 N.D. +0.7 +0.2
nitrogen source D-Alanine (N) +0.6 +1.8 N.D. +0.2 +0.2
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