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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS33820 and AZOBR_RS33825 are separated by 190 nucleotides
AZOBR_RS33825 and AZOBR_RS33830 are separated by 514 nucleotides
AZOBR_RS33830 and AZOBR_RS33835 are separated by 1095 nucleotides
AZOBR_RS33835 and AZOBR_RS33840 are separated by 31 nucleotides
AZOBR_RS33820: AZOBR_RS33820 - hypothetical protein, at 125,498 to 126,271
_RS33820
AZOBR_RS33825: AZOBR_RS33825 - hypothetical protein, at 126,462 to 127,604
_RS33825
AZOBR_RS33830: AZOBR_RS33830 - mannose-1-phosphate guanylyltransferase, at 128,119 to 129,564
_RS33830
AZOBR_RS33835: AZOBR_RS33835 - hypothetical protein, at 130,660 to 131,811
_RS33835
AZOBR_RS33840: AZOBR_RS33840 - hypothetical protein, at 131,843 to 132,091
_RS33840
Group
Condition
AZOBR
_RS33820
AZOBR
_RS33825
AZOBR
_RS33830
AZOBR
_RS33835
AZOBR
_RS33840
carbon source
a-Ketoglutaric (C)
-3.6
-1.9
-5.2
+0.2
-4.1
nitrogen source
L-Isoleucine (N)
-2.2
-1.2
-4.9
+0.2
-3.6
carbon source
a-Ketoglutaric (C)
-1.9
-1.7
-3.8
+0.5
-3.8
nitrogen source
Parabanic Acid (N)
-1.4
-1.4
-4.1
+0.4
-3.5
stress
Vancomycin 0.03 mg/ml
-3.0
-3.4
-2.9
+0.0
-0.5
carbon source
Glycerol (C)
-1.7
-2.5
-4.3
+0.3
-1.4
carbon source
D-Gluconic Acid (C)
-2.0
-2.1
-3.4
+0.2
-1.9
carbon source
D-Gluconic Acid (C)
-1.9
-2.4
-3.0
+0.5
-2.3
carbon source
D-Fructose (C)
-1.9
-1.1
-5.4
+0.2
-0.7
carbon source
L-Leucine (C)
-1.4
-2.0
-3.9
+0.4
-1.7
carbon source
D-Fructose (C)
-2.2
-1.4
-4.2
+0.3
-1.0
nitrogen source
D-Alanine (N)
-1.4
-2.2
-4.2
+0.2
-0.8
nitrogen source
Parabanic Acid (N)
-1.2
-0.8
-3.8
+0.3
-2.5
nitrogen source
L-Leucine (N)
-1.3
-1.6
-3.4
+0.3
-1.7
nitrogen source
Cytosine (N)
-1.4
-0.5
-3.8
+0.1
-2.2
carbon source
succinate (C)
-0.9
-1.8
-3.2
+0.3
-1.4
nitrogen source
Glucuronamide (N)
-1.7
-1.8
-2.9
+0.2
-0.8
nitrogen source
L-Glutamic (N)
-2.2
-1.1
-2.3
+0.2
-1.7
nitrogen source
L-Leucine (N)
-1.2
-1.2
-3.0
-0.0
-1.6
nitrogen source
L-Lysine (N)
-1.2
-1.9
-3.3
+0.2
-0.7
carbon source
L-Lactate (C)
-1.2
-0.6
-4.2
+0.2
-1.1
motility
outer cut, LB soft agar motility assay
-2.1
-1.2
-4.1
+0.1
+0.4
stress
Bacitracin 0.25 mg/ml
-2.1
-2.0
-2.8
+0.0
+0.1
nitrogen source
D-Alanine (N)
-1.4
-1.4
-3.6
+0.2
-0.1
nitrogen source
Cytosine (N)
-0.9
-0.8
-2.8
+0.2
-1.9
carbon source
Glycerol (C)
-1.9
-1.8
-2.3
+0.6
-0.9
carbon source
succinate (C)
-1.3
-0.9
-3.0
+0.4
-1.3
carbon source
L-Malic (C)
-1.3
-0.9
-3.3
+0.3
-0.9
carbon source
L-Malic (C)
-1.1
-1.3
-3.2
+0.4
-0.9
lb
LB
+1.9
+1.6
+2.8
-0.7
-0.5
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