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Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS33715 and AZOBR_RS33720 are separated by 308 nucleotides
AZOBR_RS33720 and AZOBR_RS33725 are separated by 35 nucleotides
AZOBR_RS33725 and AZOBR_RS33730 are separated by 397 nucleotides
AZOBR_RS33730 and AZOBR_RS33735 are separated by 100 nucleotides
AZOBR_RS33715: AZOBR_RS33715 - hypothetical protein, at 92,540 to 92,836
_RS33715
AZOBR_RS33720: AZOBR_RS33720 - UDP-glucose 6-dehydrogenase, at 93,145 to 94,470
_RS33720
AZOBR_RS33725: AZOBR_RS33725 - phosphomannomutase, at 94,506 to 95,912
_RS33725
AZOBR_RS33730: AZOBR_RS33730 - hypothetical protein, at 96,310 to 96,828
_RS33730
AZOBR_RS33735: AZOBR_RS33735 - hypothetical protein, at 96,929 to 97,936
_RS33735
Group
Condition
AZOBR
_RS33715
AZOBR
_RS33720
AZOBR
_RS33725
AZOBR
_RS33730
AZOBR
_RS33735
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
-3.3
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
-3.2
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
-1.7
N.D.
N.D.
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
-1.5
N.D.
N.D.
stress
Sisomicin 0.01 mg/ml
N.D.
N.D.
-1.0
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-0.9
N.D.
N.D.
stress
2-pentyl-furan 1.335528 mM
N.D.
N.D.
-0.9
N.D.
N.D.
stress
2-pentyl-furan 1.335528 mM
N.D.
N.D.
-0.9
N.D.
N.D.
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
-0.7
N.D.
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
N.D.
N.D.
-0.7
N.D.
N.D.
stress
nitrate 100 mM
N.D.
N.D.
-0.7
N.D.
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
N.D.
N.D.
-0.7
N.D.
N.D.
carbon source
D,L-Lactate (C)
N.D.
N.D.
+0.6
N.D.
N.D.
stress
3-octanone 5.2896 mM
N.D.
N.D.
+0.6
N.D.
N.D.
stress
3-octanone 4.2317 mM
N.D.
N.D.
+0.6
N.D.
N.D.
nitrogen source
L-Aspartic Acid (N)
N.D.
N.D.
+0.6
N.D.
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
N.D.
N.D.
+0.7
N.D.
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
N.D.
N.D.
+0.8
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+0.8
N.D.
N.D.
nitrogen source
Parabanic Acid (N)
N.D.
N.D.
+0.8
N.D.
N.D.
stress
2-Furfuraldehyde 0.2 vol%
N.D.
N.D.
+0.8
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
+0.8
N.D.
N.D.
carbon source
Ethanol (C)
N.D.
N.D.
+0.9
N.D.
N.D.
stress
2-pentyl-furan 1.780666667 mM
N.D.
N.D.
+0.9
N.D.
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
N.D.
N.D.
+0.9
N.D.
N.D.
nitrogen source
L-Lysine (N)
N.D.
N.D.
+0.9
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+1.0
N.D.
N.D.
nitrogen source
L-Glutamic (N)
N.D.
N.D.
+1.0
N.D.
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
+1.0
N.D.
N.D.
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
+1.2
N.D.
N.D.
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