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Cofit
Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS33515 and AZOBR_RS33520 are separated by 281 nucleotides
AZOBR_RS33520 and AZOBR_RS33525 are separated by 467 nucleotides
AZOBR_RS33525 and AZOBR_RS33530 are separated by 242 nucleotides
AZOBR_RS33530 and AZOBR_RS33535 overlap by 4 nucleotides
AZOBR_RS33515: AZOBR_RS33515 - hypothetical protein, at 32,421 to 34,088
_RS33515
AZOBR_RS33520: AZOBR_RS33520 - putative protease-like protein, at 34,370 to 36,061
_RS33520
AZOBR_RS33525: AZOBR_RS33525 - FAD-dependent oxidoreductase, at 36,529 to 37,650
_RS33525
AZOBR_RS33530: AZOBR_RS33530 - hypothetical protein, at 37,893 to 39,236
_RS33530
AZOBR_RS33535: AZOBR_RS33535 - glycosyl transferase family 1, at 39,233 to 40,480
_RS33535
Group
Condition
AZOBR
_RS33515
AZOBR
_RS33520
AZOBR
_RS33525
AZOBR
_RS33530
AZOBR
_RS33535
carbon source
a-Ketoglutaric (C)
+0.1
+0.2
+0.3
+0.1
-4.6
carbon source
a-Ketoglutaric (C)
+0.2
+0.4
+0.4
+0.5
-3.6
nitrogen source
Parabanic Acid (N)
+0.3
+0.3
+0.3
+0.3
-3.0
carbon source
D-Gluconic Acid (C)
+0.2
+0.3
+0.3
+0.3
-2.7
nitrogen source
L-Leucine (N)
+0.2
+0.1
+0.2
+0.2
-2.1
nitrogen source
L-Isoleucine (N)
-0.1
+0.4
+0.4
+0.1
-1.6
nitrogen source
Cytosine (N)
+0.5
+0.3
+0.5
+0.2
-2.2
nitrogen source
L-Citrulline (N)
+0.3
+0.1
+0.4
-0.1
-1.4
nitrogen source
Cytosine (N)
+0.3
+0.2
+0.5
+0.2
-1.8
nitrogen source
Parabanic Acid (N)
+0.6
+0.4
+0.8
+0.4
-2.7
nitrogen source
L-Leucine (N)
+0.6
+0.3
+0.2
+0.4
-2.0
nitrogen source
L-Citrulline (N)
+0.4
+0.2
+0.2
+0.1
-1.3
carbon source
D-Gluconic Acid (C)
+0.6
+0.4
+0.8
+0.1
-2.2
nitrogen source
Glucuronamide (N)
+0.3
+0.2
+0.3
+0.3
-1.4
nitrogen source
L-Glutamic (N)
+0.1
+0.2
+0.4
+0.2
-1.2
carbon source
pyruvate (C)
+0.5
+0.2
+0.3
-0.0
-1.1
carbon source
D-Fructose (C)
+0.2
+0.2
+0.3
+0.2
-1.1
carbon source
L-Glutamine (C)
+0.4
+0.3
+0.3
+0.2
-1.3
nitrogen source
Glucuronamide (N)
+0.3
+0.2
+0.5
+0.3
-1.3
carbon source
Glycerol (C)
+0.8
+0.1
+0.3
+0.1
-1.2
carbon source
L-Lactate (C)
+0.3
+0.2
+0.4
+0.3
-1.0
carbon source
D-Fructose (C)
+0.3
+0.2
+0.4
+0.4
-1.1
carbon source
L-Malic (C)
+0.7
+0.2
+0.6
+0.2
-1.4
carbon source
Glycerol (C)
+0.8
+0.3
+0.7
+0.1
-1.6
carbon source
succinate (C)
+0.5
+0.4
+0.4
+0.4
-1.3
carbon source
succinate (C)
+0.5
+0.3
+0.5
+0.3
-1.3
carbon source
L-Malic (C)
+0.4
+0.3
+0.6
+0.2
-1.1
carbon source
L-Leucine (C)
+0.5
+0.5
+0.4
+0.3
-1.2
carbon source
L-Lactate (C)
+0.5
+0.1
+0.6
+0.2
-0.8
carbon source
L-Glutamine (C)
+0.6
+0.3
+0.4
+0.3
-0.8
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