Fitness for 5 genes in Azospirillum brasilense Sp245

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 167 experiments or choose conditions or try the comparative fitness browser

500 ntAZOBR_RS31380 and AZOBR_RS31385 are separated by 1930 nucleotidesAZOBR_RS31385 and AZOBR_RS31390 are separated by 47 nucleotidesAZOBR_RS31390 and AZOBR_RS31395 are separated by 48 nucleotidesAZOBR_RS31395 and AZOBR_RS31400 are separated by 132 nucleotides AZOBR_RS31380: AZOBR_RS31380 - transcriptional regulator, at 407,836 to 408,531 _RS31380 AZOBR_RS31385: AZOBR_RS31385 - GntR family transcriptional regulator, at 410,462 to 411,118 _RS31385 AZOBR_RS31390: AZOBR_RS31390 - 3-ketoacyl-ACP reductase, at 411,166 to 411,924 _RS31390 AZOBR_RS31395: AZOBR_RS31395 - cupin, at 411,973 to 412,308 _RS31395 AZOBR_RS31400: AZOBR_RS31400 - C4-dicarboxylate ABC transporter, at 412,441 to 413,430 _RS31400
Group Condition AZOBR_RS31380 AZOBR_RS31385 AZOBR_RS31390 AZOBR_RS31395 AZOBR_RS31400
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -1.3 -0.2 -0.3
stress 2-pentyl-furan 1.335528 mM N.D. N.D. -1.1 -0.5 -0.1
motility inner cut, LB soft agar motility assay N.D. N.D. -1.3 -0.4 +0.1
nitrogen source casaminos (N) N.D. N.D. -1.6 -0.0 +0.1
stress 2-pentyl-furan 1.780666667 mM N.D. N.D. -1.3 -0.2 +0.1
stress 2-pentyl-furan 1.780666667 mM N.D. N.D. -0.3 -0.5 -0.6
stress 1-octen-3-ol 0.6030326667 mM N.D. N.D. -0.9 -0.2 -0.2
nitrogen source L-Isoleucine (N) N.D. N.D. -1.0 +0.1 -0.3
stress 6-Pentyl-2H-pyran-2-one 0.7162051667 mM N.D. N.D. -0.7 -0.3 -0.2
nitrogen source L-Threonine (N) N.D. N.D. -0.2 -0.5 -0.5
stress 1-octen-3-ol 0.7753276667 mM N.D. N.D. -0.9 -0.2 -0.1
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days N.D. N.D. -0.6 -0.2 -0.3
stress D-Cycloserine 0.125 mg/ml N.D. N.D. -0.4 -0.7 -0.0
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days N.D. N.D. -0.8 -0.2 -0.1
nitrogen source L-Serine (N) N.D. N.D. -0.7 -0.1 -0.3
nitrogen source L-Phenylalanine (N) N.D. N.D. -0.8 -0.1 -0.1
stress 3-octanone 6.3476 mM N.D. N.D. -1.0 +0.1 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.9 -0.1 +0.2
stress Bacitracin 0.25 mg/ml N.D. N.D. -1.1 +0.2 +0.2
stress benzoic 0.29 mg/ml N.D. N.D. -0.8 +0.2 +0.2
stress 3-octanone 6.3476 mM N.D. N.D. +0.2 -0.7 +0.2
motility inner cut, LB soft agar motility assay N.D. N.D. -0.5 +0.3 +0.3
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days N.D. N.D. +0.6 +0.3 -0.2
nitrogen source L-Histidine (N) N.D. N.D. +0.8 -0.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. +1.2 -0.3 -0.0
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB N.D. N.D. +0.8 -0.2 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. +0.4 +0.3 +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB N.D. N.D. +0.5 +0.4 +0.4
stress Chlorite 1 mM N.D. N.D. +0.6 +0.8 +0.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB N.D. N.D. +1.0 +0.6 +0.3
remove
AZOBR_RS31380
plot		 remove
AZOBR_RS31385
plot		 remove
AZOBR_RS31390		 remove
AZOBR_RS31395
plot		 remove
AZOBR_RS31400
plot