Fitness for 5 genes in Azospirillum brasilense Sp245

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 167 experiments or choose conditions or try the comparative fitness browser

500 ntAZOBR_RS31195 and AZOBR_RS31200 are separated by 6 nucleotidesAZOBR_RS31200 and AZOBR_RS31205 are separated by 4 nucleotidesAZOBR_RS31205 and AZOBR_RS31210 overlap by 4 nucleotidesAZOBR_RS31210 and AZOBR_RS31215 are separated by 38 nucleotides AZOBR_RS31195: AZOBR_RS31195 - peptidyl-tRNA hydrolase, at 362,883 to 363,458 _RS31195 AZOBR_RS31200: AZOBR_RS31200 - sugar ABC transporter permease, at 363,465 to 364,442 _RS31200 AZOBR_RS31205: AZOBR_RS31205 - sugar ABC transporter permease, at 364,447 to 365,511 _RS31205 AZOBR_RS31210: AZOBR_RS31210 - sugar ABC transporter ATP-binding protein, at 365,508 to 367,058 _RS31210 AZOBR_RS31215: AZOBR_RS31215 - sugar ABC transporter substrate-binding protein, at 367,097 to 368,062 _RS31215
Group Condition AZOBR_RS31195 AZOBR_RS31200 AZOBR_RS31205 AZOBR_RS31210 AZOBR_RS31215
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.4 -0.9 -1.7 -0.8
motility outer cut, LB soft agar motility assay N.D. -0.1 -0.8 -1.1 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.3 -0.4 -0.6 -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.9 -0.1 -0.9 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.0 -0.7 -1.0 -0.2
stress 2-pentyl-furan 1.780666667 mM N.D. -0.3 -0.3 -0.5 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.1 -0.4 -0.3 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.1 +0.1 -0.9 -0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.5 +0.3 -0.5 -0.8
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB N.D. -0.1 +0.2 -1.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.1 +0.2 -0.4 -1.2
motility inner cut, LB soft agar motility assay N.D. -0.0 -0.4 -1.0 -0.1
motility inner cut, LB soft agar motility assay N.D. +0.4 -0.0 -0.8 -0.8
motility inner cut, LB soft agar motility assay N.D. +0.3 -0.3 -0.6 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.0 -0.8 -0.2 +0.4
stress 3-octanone 4.2317 mM N.D. +0.4 -0.1 -0.4 -0.4
stress Cobalt chloride 0.3 mM N.D. +0.5 -0.3 -0.6 +0.0
nitrogen source L-Histidine (N) N.D. -0.1 +0.2 -0.7 +0.3
carbon source Glycerol (C) N.D. -0.3 -0.3 -0.2 +0.6
nitrogen source Parabanic Acid (N) N.D. -0.1 -0.5 -0.2 +0.7
nitrogen source L-Isoleucine (N) N.D. -0.4 +0.8 -0.1 -0.3
nitrogen source L-Phenylalanine (N) N.D. +0.2 -0.6 +0.2 +0.3
stress Benzethonium chloride 0.003 mM N.D. -0.5 +0.0 +0.5 +0.3
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days N.D. -0.2 -0.0 +0.3 +0.7
stress 2-Furfuraldehyde 0.2 vol% N.D. -0.1 +0.2 +0.3 +0.7
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days N.D. +0.1 +0.1 +0.4 +0.6
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days N.D. +0.4 +0.2 +0.2 +0.6
stress benzoic 0.145 mg/ml N.D. +0.4 +0.4 +0.4 +0.3
anaerobic; rich media LB; anaerobic N.D. +0.2 +0.3 +0.2 +0.7
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days N.D. +0.3 +0.5 +0.5 +0.5
remove
AZOBR_RS31195
plot		 remove
AZOBR_RS31200
plot		 remove
AZOBR_RS31205		 remove
AZOBR_RS31210
plot		 remove
AZOBR_RS31215
plot