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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS31065 and AZOBR_RS31070 overlap by 4 nucleotides
AZOBR_RS31070 and AZOBR_RS31075 are separated by 73 nucleotides
AZOBR_RS31075 and AZOBR_RS31080 are separated by 133 nucleotides
AZOBR_RS31080 and AZOBR_RS31085 are separated by 57 nucleotides
AZOBR_RS31065: AZOBR_RS31065 - hypothetical protein, at 335,990 to 336,550
_RS31065
AZOBR_RS31070: AZOBR_RS31070 - hypothetical protein, at 336,547 to 337,155
_RS31070
AZOBR_RS31075: AZOBR_RS31075 - UTP--glucose-1-phosphate uridylyltransferase, at 337,229 to 338,098
_RS31075
AZOBR_RS31080: AZOBR_RS31080 - hypothetical protein, at 338,232 to 338,948
_RS31080
AZOBR_RS31085: AZOBR_RS31085 - hypothetical protein, at 339,006 to 339,752
_RS31085
Group
Condition
AZOBR
_RS31065
AZOBR
_RS31070
AZOBR
_RS31075
AZOBR
_RS31080
AZOBR
_RS31085
stress
2-pentyl-furan 1.780666667 mM
-1.6
-1.7
N.D.
-0.5
-0.4
stress
D-Cycloserine 0.125 mg/ml
-2.7
-0.5
N.D.
-0.3
-0.1
stress
Cobalt chloride 0.2 mM
-2.5
-0.4
N.D.
-0.3
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.7
-1.6
N.D.
-1.2
+0.1
carbon source
L-Lactate (C)
-2.5
-0.0
N.D.
-0.3
-0.3
stress
2-pentyl-furan 1.335528 mM
-1.6
+0.8
N.D.
-1.9
-0.2
motility
outer cut, LB soft agar motility assay
-0.7
-0.9
N.D.
-0.5
-0.6
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
-2.1
-0.7
N.D.
+0.2
-0.1
carbon source
succinate (C)
-1.9
-0.2
N.D.
-0.2
-0.1
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-2.1
+0.3
N.D.
-0.2
-0.2
carbon source
pyruvate (C)
-0.8
-0.3
N.D.
-0.7
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.2
-0.5
N.D.
-0.9
+0.5
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-1.9
+0.2
N.D.
-0.2
-0.2
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
-2.1
-0.1
N.D.
-0.4
+0.6
stress
Cobalt chloride 0.3 mM
-1.8
+0.4
N.D.
-0.3
-0.2
stress
Chlorite 1 mM
-1.4
+0.4
N.D.
-0.6
-0.3
nitrogen source
nitrate (N)
-1.2
+0.2
N.D.
-0.5
-0.2
stress
2-pentyl-furan 1.780666667 mM
-1.6
+0.4
N.D.
-0.5
+0.1
motility
inner cut, LB soft agar motility assay
-0.1
-1.8
N.D.
+0.1
+0.3
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
-2.0
-0.4
N.D.
+0.7
+0.2
nitrogen source
L-Leucine (N)
-1.8
+0.5
N.D.
+0.2
-0.1
stress
2-pentyl-furan 1.335528 mM
+0.8
-1.6
N.D.
-0.2
-0.0
stress
2-pentyl-furan 2.671 mM
-1.5
+0.7
N.D.
-0.0
+0.1
stress
3-octanone 4.2317 mM
+0.6
-1.3
N.D.
-0.0
+0.3
nitrogen source
L-Isoleucine (N)
+0.8
+0.2
N.D.
-0.3
-0.8
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
+0.9
-1.1
N.D.
+0.0
+0.1
stress
3-octanone 6.3476 mM
-1.4
+2.5
N.D.
-0.9
+0.0
lb no stress control
LB no stress control
-0.6
+1.3
N.D.
-0.2
+0.0
stress
3-octanone 5.2896 mM
+1.2
+0.9
N.D.
-0.4
-0.2
stress
2-pentyl-furan 1.780666667 mM
+0.9
+2.0
N.D.
-0.5
+0.0
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