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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS30595 and AZOBR_RS30600 are separated by 176 nucleotides
AZOBR_RS30600 and AZOBR_RS30605 are separated by 491 nucleotides
AZOBR_RS30605 and AZOBR_RS30610 are separated by 112 nucleotides
AZOBR_RS30610 and AZOBR_RS30615 are separated by 98 nucleotides
AZOBR_RS30595: AZOBR_RS30595 - hypothetical protein, at 221,028 to 221,252
_RS30595
AZOBR_RS30600: AZOBR_RS30600 - polyhydroxyalkanoate synthesis repressor, at 221,429 to 222,067
_RS30600
AZOBR_RS30605: AZOBR_RS30605 - poly-beta-hydroxybutyrate polymerase, at 222,559 to 223,797
_RS30605
AZOBR_RS30610: AZOBR_RS30610 - acetyl-CoA acetyltransferase, at 223,910 to 225,085
_RS30610
AZOBR_RS30615: AZOBR_RS30615 - acetoacetyl-CoA reductase, at 225,184 to 225,906
_RS30615
Group
Condition
AZOBR
_RS30595
AZOBR
_RS30600
AZOBR
_RS30605
AZOBR
_RS30610
AZOBR
_RS30615
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
N.D.
-1.2
-1.2
-1.4
-0.6
stress
Paraquat dichloride 0.04 mg/ml
N.D.
-2.5
+0.0
-1.3
-0.5
nitrogen source
L-Threonine (N)
N.D.
-0.6
-0.7
-3.2
+0.3
carbon source
a-Ketoglutaric (C)
N.D.
-3.5
-0.9
+0.4
-0.2
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
N.D.
-2.0
-1.2
+0.0
-0.8
carbon source
L-Proline (C)
N.D.
-1.7
-0.5
-1.5
+0.1
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
N.D.
-1.4
-0.5
-0.9
-0.8
carbon source
a-Ketoglutaric (C)
N.D.
-1.8
-0.9
-0.8
+0.0
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
N.D.
-1.3
-1.7
+0.2
-0.6
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
N.D.
-1.1
-0.2
-1.2
-0.7
nitrogen source
L-Glutamic (N)
N.D.
+0.8
+0.2
-3.9
-0.3
nitrogen source
L-Isoleucine (N)
N.D.
-0.4
-0.7
-1.6
-0.5
stress
2-pentyl-furan 1.780666667 mM
N.D.
+0.3
-0.9
-2.5
-0.0
carbon source
D-Fructose (C)
N.D.
+0.1
-0.8
-2.0
-0.4
carbon source
D-Gluconic Acid (C)
N.D.
-0.3
-0.5
-1.4
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-1.1
+0.2
-1.9
+0.6
carbon source
L-Leucine (C)
N.D.
+0.4
-1.8
+0.1
-0.7
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
N.D.
-0.8
-0.8
+0.6
-0.9
stress
3-octanone 6.3476 mM
N.D.
-0.9
-1.5
+0.4
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-1.2
+0.6
-1.3
+0.2
carbon source
L-Proline (C)
N.D.
-0.7
-0.9
+1.1
-0.2
stress
Chlorite 1 mM
N.D.
+1.8
-0.2
-2.0
-0.1
stress
D-Cycloserine 0.125 mg/ml
N.D.
+1.8
-0.0
-0.7
-0.5
nitrogen source
nitrate (N)
N.D.
+0.5
-0.7
+1.4
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-1.3
+0.5
+1.3
+0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-1.1
+0.9
+0.6
+0.6
lb
LB
N.D.
+1.2
+0.3
+0.7
-0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-1.5
+0.7
+1.2
+0.9
stress
Cobalt chloride 0.2 mM
N.D.
+1.3
-0.3
+1.1
-0.6
motility
outer cut, LB soft agar motility assay
N.D.
+0.4
-1.0
+3.0
-0.5
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