Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS29840 and AZOBR_RS29845 are separated by 287 nucleotidesAZOBR_RS29845 and AZOBR_RS29850 are separated by 5 nucleotidesAZOBR_RS29850 and AZOBR_RS29855 overlap by 4 nucleotidesAZOBR_RS29855 and AZOBR_RS29860 are separated by 4 nucleotides AZOBR_RS29840: AZOBR_RS29840 - sulfoxide reductase catalytic subunit YedY, at 41,845 to 42,792 _RS29840 AZOBR_RS29845: AZOBR_RS29845 - oxidoreductase, at 43,080 to 44,108 _RS29845 AZOBR_RS29850: AZOBR_RS29850 - ketohydroxyglutarate aldolase, at 44,114 to 44,749 _RS29850 AZOBR_RS29855: AZOBR_RS29855 - GntR family transcriptional regulator, at 44,746 to 45,513 _RS29855 AZOBR_RS29860: AZOBR_RS29860 - ketodeoxygluconokinase, at 45,518 to 46,450 _RS29860
Group Condition AZOBR_RS29840 AZOBR_RS29845 AZOBR_RS29850 AZOBR_RS29855 AZOBR_RS29860
stress Chlorite 1 mM -4.6 -0.0 N.D. N.D. -0.4
stress 2-pentyl-furan 1.335528 mM -1.4 +0.0 N.D. N.D. +0.0
lb LB -0.1 -0.2 N.D. N.D. -0.8
stress Paraquat dichloride 0.04 mg/ml +0.3 -0.5 N.D. N.D. -0.9
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.1 -0.4 N.D. N.D. -0.6
carbon source D-Gluconic Acid (C) -0.3 +0.1 N.D. N.D. -0.8
stress copper (II) chloride 2 mM -0.1 -0.1 N.D. N.D. -0.7
stress 2-pentyl-furan 1.780666667 mM -0.3 -0.4 N.D. N.D. -0.2
lb LB +0.2 -0.3 N.D. N.D. -0.8
stress Cobalt chloride 0.2 mM -0.2 -0.2 N.D. N.D. -0.4
stress Bacitracin 0.25 mg/ml +0.1 -0.4 N.D. N.D. -0.4
stress Paraquat dichloride 0.02 mg/ml +0.1 -0.2 N.D. N.D. -0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.1 -0.0 N.D. N.D. -0.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.4 +0.1 N.D. N.D. -0.3
motility outer cut, LB soft agar motility assay -0.6 -0.2 N.D. N.D. +0.5
stress 2-pentyl-furan 2.671 mM -0.2 +0.2 N.D. N.D. -0.4
stress Sisomicin 0.01 mg/ml +0.3 -0.0 N.D. N.D. -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -0.1 N.D. N.D. +0.5
stress 2-Furfuraldehyde 0.2 vol% +0.3 +0.2 N.D. N.D. -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.3 N.D. N.D. +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -0.5 N.D. N.D. +0.6
motility inner cut, LB soft agar motility assay +0.0 -0.3 N.D. N.D. +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -0.5 N.D. N.D. +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.6 N.D. N.D. +0.6
stress 3-octanone 6.3476 mM +0.7 +0.1 N.D. N.D. -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 +0.0 N.D. N.D. +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 +0.0 N.D. N.D. +0.8
anaerobic; rich media LB; anaerobic +0.2 -0.1 N.D. N.D. +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 -0.3 N.D. N.D. +1.0
motility inner cut, LB soft agar motility assay +0.5 -0.6 N.D. N.D. +0.8
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