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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS29610 and AZOBR_RS29615 are separated by 36 nucleotides
AZOBR_RS29615 and AZOBR_RS29620 are separated by 11 nucleotides
AZOBR_RS29620 and AZOBR_RS29625 are separated by 114 nucleotides
AZOBR_RS29625 and AZOBR_RS29630 are separated by 121 nucleotides
AZOBR_RS29610: AZOBR_RS29610 - hypothetical protein, at 773,294 to 773,959
_RS29610
AZOBR_RS29615: AZOBR_RS29615 - arginine ABC transporter ATP-binding protein, at 773,996 to 774,751
_RS29615
AZOBR_RS29620: AZOBR_RS29620 - cyclohexadienyl dehydratase precursor, at 774,763 to 775,602
_RS29620
AZOBR_RS29625: AZOBR_RS29625 - agmatinase, at 775,717 to 776,787
_RS29625
AZOBR_RS29630: AZOBR_RS29630 - amidase hydantoinase/carbamoylase family, at 776,909 to 778,102
_RS29630
Group
Condition
AZOBR
_RS29610
AZOBR
_RS29615
AZOBR
_RS29620
AZOBR
_RS29625
AZOBR
_RS29630
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
+0.2
-0.8
+0.1
+0.0
-3.4
stress
2-pentyl-furan 1.780666667 mM
-0.8
-0.1
-0.3
-0.1
-2.1
stress
3-octanone 6.3476 mM
-0.9
+0.1
-0.3
-0.2
-1.5
motility
inner cut, LB soft agar motility assay
+0.0
+0.7
+0.1
-0.1
-3.2
stress
3-octanone 6.3476 mM
-1.0
-0.7
-0.3
-0.1
-0.2
stress
1-octen-3-ol 0.7753276667 mM
-0.6
+0.0
-0.2
-0.0
-1.3
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
-0.5
+0.1
-0.1
+0.0
-1.5
nitrogen source
L-Histidine (N)
-0.1
-1.3
-0.2
-0.1
-0.3
stress
2-pentyl-furan 1.780666667 mM
-0.6
+0.4
+0.0
-0.0
-1.8
stress
D-Cycloserine 0.125 mg/ml
+0.2
-0.2
-0.1
+0.2
-2.1
stress
3-octanone 6.3476 mM
-0.7
+0.5
+0.2
-0.2
-1.6
stress
2-pentyl-furan 1.335528 mM
-0.2
-0.3
+0.3
-0.1
-1.4
stress
2-pentyl-furan 1.780666667 mM
+0.3
-0.3
+0.6
-0.2
-2.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+0.5
+0.8
-0.1
-2.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
-0.4
+0.7
-0.3
-1.4
stress
2-pentyl-furan 1.335528 mM
+0.4
-0.2
-0.0
+0.1
-1.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+0.6
+0.6
-0.2
-2.4
motility
outer cut, LB soft agar motility assay
+0.2
-0.3
+0.8
+0.5
-2.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
+0.5
+0.3
+0.1
-2.2
stress
2-pentyl-furan 1.335528 mM
-0.5
+0.4
-0.7
+0.1
-0.2
stress
Sisomicin 0.01 mg/ml
+0.2
+0.2
+0.3
+0.0
-1.4
stress
1-octen-3-ol 0.6784116667 mM
-1.2
-0.3
+0.2
-0.1
+0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
+0.4
+0.5
+0.1
-1.2
nitrogen source
L-Glutamic (N)
-0.4
+0.7
+0.2
-0.4
+0.7
nitrogen source
L-Phenylalanine (N)
+0.2
-0.5
+0.2
-0.0
+1.3
stress
2-pentyl-furan 2.671 mM
-0.1
-0.1
+0.8
-0.2
+0.8
nitrogen source
L-Serine (N)
-0.0
-0.1
+0.2
+0.2
+1.4
carbon source
L-Leucine (C)
-0.0
+0.6
+0.3
+0.2
+0.8
lb
LB
-0.1
+1.0
+0.6
+0.1
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.5
+0.2
+0.2
+1.7
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AZOBR_RS29620
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