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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS28610 and AZOBR_RS28615 are separated by 81 nucleotides
AZOBR_RS28615 and AZOBR_RS28620 are separated by 278 nucleotides
AZOBR_RS28620 and AZOBR_RS28625 overlap by 4 nucleotides
AZOBR_RS28625 and AZOBR_RS28630 are separated by 6 nucleotides
AZOBR_RS28610: AZOBR_RS28610 - arylesterase, at 593,452 to 594,267
_RS28610
AZOBR_RS28615: AZOBR_RS28615 - hypothetical protein, at 594,349 to 594,717
_RS28615
AZOBR_RS28620: AZOBR_RS28620 - hypothetical protein, at 594,996 to 595,298
_RS28620
AZOBR_RS28625: AZOBR_RS28625 - hypothetical protein, at 595,295 to 595,534
_RS28625
AZOBR_RS28630: AZOBR_RS28630 - hypothetical protein, at 595,541 to 595,846
_RS28630
Group
Condition
AZOBR
_RS28610
AZOBR
_RS28615
AZOBR
_RS28620
AZOBR
_RS28625
AZOBR
_RS28630
stress
3-octanone 6.3476 mM
-0.1
+0.2
-2.1
-0.5
-2.0
stress
3-octanone 6.3476 mM
-0.1
-0.5
-2.5
-1.3
-0.2
stress
2-pentyl-furan 1.780666667 mM
-0.2
-0.6
-2.7
-0.4
-0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.7
-0.3
-0.0
-2.4
-0.5
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
+0.1
+0.7
-2.6
-1.9
-0.3
nitrogen source
L-Serine (N)
-0.2
-0.7
-1.1
-1.1
-0.5
stress
3-octanone 4.2317 mM
-0.1
-0.3
-2.7
-0.5
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.1
-0.0
-2.7
-0.7
-0.3
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.1
+0.4
-2.5
-0.9
-0.6
stress
3-octanone 4.2317 mM
-0.3
+0.0
-1.5
-0.9
-0.8
stress
1-octen-3-ol 0.7753276667 mM
-0.1
-0.4
-1.8
-0.4
-0.5
stress
Benzethonium chloride 0.003 mM
-0.2
-1.0
-1.6
-0.9
+0.7
dmso control
DMSO control
+0.2
-0.5
-2.6
+0.3
-0.3
stress
2-pentyl-furan 1.335528 mM
+0.1
-0.8
-2.5
+0.4
+0.1
stress
3-octanone 6.3476 mM
+0.1
+0.2
-2.7
-0.4
+0.1
stress
2-pentyl-furan 1.335528 mM
-0.2
-1.0
-2.5
+0.7
+0.5
stress
3-octanone 6.3476 mM
+0.1
-0.2
-2.5
-0.2
+0.5
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
+0.3
-0.1
-2.7
+0.2
+0.0
stress
2-pentyl-furan 1.780666667 mM
+0.0
+1.3
-0.4
-1.5
-1.5
stress
3-octanone 5.2896 mM
+0.5
+0.6
-1.7
-0.9
-0.4
stress
2-pentyl-furan 2.671 mM
+0.3
+1.3
-2.4
-1.2
+0.2
stress
Sisomicin 0.01 mg/ml
+0.5
+0.2
-1.5
-0.5
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.7
-0.1
+0.1
-2.0
-0.4
stress
1-octen-3-ol 0.7753276667 mM
+0.4
-0.4
-1.5
+0.4
-0.6
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
-0.2
-1.1
-0.4
+1.4
-1.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.0
-0.7
-0.6
+1.4
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
-0.2
-0.5
+1.1
-1.2
stress
2-pentyl-furan 1.335528 mM
-0.1
+0.9
-0.5
+0.4
-1.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
+1.1
-0.7
-2.2
+0.7
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-0.2
-1.1
+1.5
+1.7
+0.2
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AZOBR_RS28620
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