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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS28360 and AZOBR_RS28365 are separated by 44 nucleotides
AZOBR_RS28365 and AZOBR_RS28370 overlap by 4 nucleotides
AZOBR_RS28370 and AZOBR_RS28380 are separated by 1088 nucleotides
AZOBR_RS28380 and AZOBR_RS28385 are separated by 18 nucleotides
AZOBR_RS28360: AZOBR_RS28360 - radical SAM protein, at 535,348 to 536,655
_RS28360
AZOBR_RS28365: AZOBR_RS28365 - glycosyl transferase family 1, at 536,700 to 537,794
_RS28365
AZOBR_RS28370: AZOBR_RS28370 - hypothetical protein, at 537,791 to 538,915
_RS28370
AZOBR_RS28380: AZOBR_RS28380 - glycosyltransferase, at 540,004 to 541,101
_RS28380
AZOBR_RS28385: AZOBR_RS28385 - membrane protein, at 541,120 to 541,629
_RS28385
Group
Condition
AZOBR
_RS28360
AZOBR
_RS28365
AZOBR
_RS28370
AZOBR
_RS28380
AZOBR
_RS28385
stress
2-pentyl-furan 1.780666667 mM
-0.3
-1.7
+0.3
-0.2
-3.5
stress
3-octanone 4.2317 mM
-0.3
-1.2
-0.1
+0.1
-3.3
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
-0.3
-1.1
+0.0
+0.1
-3.3
stress
3-octanone 6.3476 mM
-0.2
-0.6
-0.5
+0.0
-3.3
stress
2-pentyl-furan 1.780666667 mM
-0.2
-1.1
+0.1
+0.1
-3.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-2.8
-0.1
+0.1
-1.4
stress
1-octen-3-ol 0.7753276667 mM
+0.1
-0.8
+0.0
+0.0
-3.4
stress
3-octanone 6.3476 mM
-0.3
+0.1
-0.2
-0.0
-3.5
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
-0.4
-0.0
-0.1
+0.2
-3.4
stress
3-octanone 6.3476 mM
+0.2
-0.5
-0.2
+0.2
-3.3
motility
outer cut, LB soft agar motility assay
-0.8
-3.4
-0.0
-0.1
+0.7
stress
2-pentyl-furan 1.335528 mM
+0.1
+0.4
-0.5
+0.1
-3.5
stress
2-pentyl-furan 1.335528 mM
-0.2
+0.4
+0.0
-0.3
-3.3
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
-0.1
+0.2
+0.1
-0.0
-3.4
stress
3-octanone 5.2896 mM
-0.1
+0.4
+0.0
-0.1
-3.3
stress
2-pentyl-furan 1.335528 mM
-0.4
+0.5
+0.3
-0.2
-3.3
stress
1-octen-3-ol 0.6030326667 mM
+0.1
+0.0
+0.1
+0.1
-3.4
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
-0.2
+0.6
-0.0
-0.1
-3.3
stress
2-pentyl-furan 2.671 mM
-0.4
+0.3
+0.5
-0.1
-3.2
stress
1-octen-3-ol 0.6784116667 mM
-0.0
+0.4
-0.0
+0.0
-3.3
stress
1-octen-3-ol 0.6784116667 mM
-0.1
+0.5
+0.1
+0.1
-3.3
stress
1-octen-3-ol 0.6030326667 mM
-0.4
+0.7
+0.2
+0.1
-3.3
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
-0.4
-0.7
+0.1
+0.1
-1.8
stress
2-pentyl-furan 1.335528 mM
+0.3
+0.3
-0.0
+0.3
-3.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-2.6
-0.6
-0.3
+1.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-2.5
+0.0
-0.2
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-2.5
-0.3
+0.4
+0.6
stress
3-octanone 6.3476 mM
-0.0
+1.3
-0.1
+0.2
-3.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
-2.7
-0.4
+0.4
+1.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+0.0
+0.8
+0.5
+1.5
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