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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS28160 and AZOBR_RS28165 are separated by 151 nucleotides
AZOBR_RS28165 and AZOBR_RS28170 are separated by 36 nucleotides
AZOBR_RS28170 and AZOBR_RS28175 are separated by 126 nucleotides
AZOBR_RS28175 and AZOBR_RS28180 are separated by 26 nucleotides
AZOBR_RS28160: AZOBR_RS28160 - hypothetical protein, at 489,780 to 490,349
_RS28160
AZOBR_RS28165: AZOBR_RS28165 - hypothetical protein, at 490,501 to 490,743
_RS28165
AZOBR_RS28170: AZOBR_RS28170 - TetR family transcriptional regulator, at 490,780 to 491,376
_RS28170
AZOBR_RS28175: AZOBR_RS28175 - short-chain dehydrogenase, at 491,503 to 492,258
_RS28175
AZOBR_RS28180: AZOBR_RS28180 - acetyl-CoA acetyltransferase, at 492,285 to 493,478
_RS28180
Group
Condition
AZOBR
_RS28160
AZOBR
_RS28165
AZOBR
_RS28170
AZOBR
_RS28175
AZOBR
_RS28180
stress
2-pentyl-furan 1.335528 mM
-0.2
N.D.
N.D.
-2.8
-1.6
lb
LB
-0.7
N.D.
N.D.
-1.3
-2.2
carbon source
D-Gluconic Acid (C)
-0.5
N.D.
N.D.
-1.0
-1.4
stress
2-pentyl-furan 2.671 mM
-0.2
N.D.
N.D.
-0.4
-1.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
N.D.
N.D.
-1.1
-0.6
stress
Paraquat dichloride 0.02 mg/ml
-0.1
N.D.
N.D.
-0.3
-1.6
stress
Benzethonium chloride 0.003 mM
-0.2
N.D.
N.D.
-0.9
-0.9
motility
inner cut, LB soft agar motility assay
-0.1
N.D.
N.D.
-1.8
+0.1
stress
D-Cycloserine 0.125 mg/ml
-0.4
N.D.
N.D.
+0.2
-1.5
stress
3-octanone 4.2317 mM
-0.1
N.D.
N.D.
-1.3
-0.2
lb no stress control
LB no stress control
-0.3
N.D.
N.D.
-0.8
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
N.D.
N.D.
-0.1
-1.8
stress
3-octanone 6.3476 mM
+0.2
N.D.
N.D.
+0.3
-1.9
stress
Chlorite 1 mM
-0.3
N.D.
N.D.
+0.2
-1.1
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
+0.3
N.D.
N.D.
+0.0
-1.4
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
-0.4
N.D.
N.D.
-1.2
+0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
N.D.
N.D.
+0.8
-1.4
nitrogen source
nitrate (N)
+0.2
N.D.
N.D.
+0.5
-1.2
nitrogen source
L-Glutamic (N)
+0.5
N.D.
N.D.
+0.1
-1.1
nitrogen source
L-Isoleucine (N)
+0.4
N.D.
N.D.
-1.2
+0.6
stress
2-pentyl-furan 1.780666667 mM
-0.4
N.D.
N.D.
+1.4
-1.1
dmso control
DMSO control
-0.6
N.D.
N.D.
+0.5
+0.4
nitrogen source
Parabanic Acid (N)
+0.4
N.D.
N.D.
-0.2
+1.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.2
N.D.
N.D.
+0.3
-0.2
carbon source
L-Lactate (C)
+0.2
N.D.
N.D.
+0.6
+0.7
carbon source
L-Proline (C)
+0.4
N.D.
N.D.
+0.4
+0.9
nitrogen source
L-Citrulline (N)
+0.4
N.D.
N.D.
+0.3
+1.0
carbon source
L-Malic (C)
+0.2
N.D.
N.D.
+0.7
+0.8
nitrogen source
L-Asparagine (N)
+0.4
N.D.
N.D.
+0.9
+0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.5
N.D.
N.D.
+0.7
+1.4
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