Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS27935 and AZOBR_RS27940 are separated by 27 nucleotidesAZOBR_RS27940 and AZOBR_RS27950 are separated by 1743 nucleotidesAZOBR_RS27950 and AZOBR_RS27955 are separated by 131 nucleotidesAZOBR_RS27955 and AZOBR_RS27960 overlap by 4 nucleotides AZOBR_RS27935: AZOBR_RS27935 - ABC transporter substrate-binding protein, at 437,219 to 438,172 _RS27935 AZOBR_RS27940: AZOBR_RS27940 - ABC transporter permease, at 438,200 to 439,189 _RS27940 AZOBR_RS27950: AZOBR_RS27950 - transcriptional regulator, at 440,933 to 442,111 _RS27950 AZOBR_RS27955: AZOBR_RS27955 - glycoside hydrolase family 43, at 442,243 to 443,313 _RS27955 AZOBR_RS27960: AZOBR_RS27960 - multidrug ABC transporter ATP-binding protein, at 443,310 to 446,057 _RS27960
Group Condition AZOBR_RS27935 AZOBR_RS27940 AZOBR_RS27950 AZOBR_RS27955 AZOBR_RS27960
stress 2-pentyl-furan 2.671 mM -1.0 -0.0 -1.3 -0.1 +0.2
nitrogen source L-Isoleucine (N) +0.0 +0.0 -1.1 -0.6 -0.1
stress 1-octen-3-ol 0.7753276667 mM -0.3 -0.3 -1.0 -0.2 +0.1
carbon source D-Gluconic Acid (C) -0.5 -0.3 -1.3 +0.2 +0.3
nitrogen source L-Lysine (N) -0.1 -0.0 -0.9 -0.1 -0.4
lb no stress control LB no stress control -0.2 -0.1 -0.8 -0.1 -0.3
stress 2-pentyl-furan 1.780666667 mM -0.3 -0.4 -0.4 -0.0 -0.2
stress 2-pentyl-furan 1.335528 mM -0.3 -0.2 -0.5 -0.4 +0.1
stress 1-octen-3-ol 0.7753276667 mM -0.2 -0.1 -0.5 -0.3 -0.3
stress 3-octanone 4.2317 mM -0.6 -0.3 -0.1 -0.4 +0.1
lb no stress control LB no stress control -0.5 +0.0 -0.3 -0.4 +0.0
nitrogen source casaminos (N) +0.2 -0.3 -0.5 -0.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.4 -0.4 -0.2 -0.7
lb LB +0.5 -0.0 -1.0 -0.1 -0.3
stress 3-octanone 6.3476 mM -0.1 +0.3 -0.2 -0.7 -0.2
stress 6-Pentyl-2H-pyran-2-one 0.5570485 mM -0.6 -0.3 +0.1 -0.4 +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 +0.1 +0.3 -0.3 -0.4
dmso control DMSO control +0.3 +0.0 -0.8 -0.1 -0.1
stress 1-octen-3-ol 0.7753276667 mM -0.6 -0.1 +0.5 -0.3 +0.1
stress 3-octanone 5.2896 mM -0.4 -0.1 +0.4 -0.4 +0.0
stress Cobalt chloride 0.2 mM +0.1 -0.2 -0.9 +0.0 +0.6
stress Sisomicin 0.01 mg/ml +0.3 -0.0 -0.8 +0.2 +0.1
stress 2-pentyl-furan 1.335528 mM +0.2 -0.3 -0.1 -0.3 +0.4
stress Paraquat dichloride 0.04 mg/ml +0.5 -0.2 -0.3 +0.4 -0.2
nitrogen source L-Glutamic (N) +0.0 -0.4 +1.1 -0.0 -0.0
stress 2-pentyl-furan 1.335528 mM -0.1 +0.2 +0.7 +0.2 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 -0.1 +0.6 -0.1 +0.1
stress 2-pentyl-furan 1.780666667 mM +0.3 -0.2 +0.7 -0.2 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.2 +0.4 +0.4 +0.3
motility inner cut, LB soft agar motility assay -0.0 -0.1 +1.6 +0.1 +0.1
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AZOBR_RS27935
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