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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS27820 and AZOBR_RS27825 are separated by 252 nucleotides
AZOBR_RS27825 and AZOBR_RS27830 are separated by 128 nucleotides
AZOBR_RS27830 and AZOBR_RS27835 are separated by 68 nucleotides
AZOBR_RS27835 and AZOBR_RS27840 are separated by 47 nucleotides
AZOBR_RS27820: AZOBR_RS27820 - carboxyvinyl-carboxyphosphonate phosphorylmutase, at 411,223 to 412,095
_RS27820
AZOBR_RS27825: AZOBR_RS27825 - hypothetical protein, at 412,348 to 412,959
_RS27825
AZOBR_RS27830: AZOBR_RS27830 - proline racemase, at 413,088 to 414,101
_RS27830
AZOBR_RS27835: AZOBR_RS27835 - polyamine ABC transporter permease, at 414,170 to 414,958
_RS27835
AZOBR_RS27840: AZOBR_RS27840 - polyamine ABC transporter permease, at 415,006 to 415,818
_RS27840
Group
Condition
AZOBR
_RS27820
AZOBR
_RS27825
AZOBR
_RS27830
AZOBR
_RS27835
AZOBR
_RS27840
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
-3.7
-1.0
-1.0
-0.3
+0.2
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-2.8
-2.0
-0.7
-0.4
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
-0.9
-3.0
-0.3
+0.1
+0.1
motility
inner cut, LB soft agar motility assay
-1.9
-1.1
-0.2
-0.3
-0.4
stress
3-octanone 4.2317 mM
-0.4
-2.9
-0.2
+0.0
-0.2
stress
3-octanone 5.2896 mM
-0.7
-2.9
-0.2
+0.1
+0.0
nitrogen source
L-Histidine (N)
-3.0
-0.5
-0.2
-0.1
+0.4
stress
2-Furfuraldehyde 0.2 vol%
-1.6
-1.3
-0.1
-0.2
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-2.4
-0.8
-0.1
-0.1
+0.2
stress
2-pentyl-furan 1.780666667 mM
-0.0
-3.1
+0.3
-0.3
+0.1
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
-1.1
-1.5
-0.3
-0.1
+0.0
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-2.0
-0.4
-0.6
+0.1
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.4
-0.6
-0.9
+0.1
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
-0.1
-3.0
+0.1
-0.0
+0.1
stress
3-octanone 6.3476 mM
-0.5
-2.7
+0.0
+0.5
-0.2
lb no stress control
LB no stress control
+0.1
-2.9
+0.4
-0.1
-0.3
stress
2-pentyl-furan 1.335528 mM
+0.0
-3.1
+0.2
-0.0
+0.1
stress
Paraquat dichloride 0.02 mg/ml
+0.4
-3.7
+0.4
+0.1
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
+0.1
-3.0
+0.2
+0.0
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-2.4
-0.2
+0.1
-0.4
+0.2
stress
3-octanone 6.3476 mM
-0.0
-2.9
+0.1
+0.3
+0.1
dmso control
DMSO control
+0.1
-3.0
+0.5
-0.1
+0.1
stress
3-octanone 6.3476 mM
+0.5
-2.9
-0.6
+0.5
+0.4
stress
2-pentyl-furan 1.780666667 mM
+1.0
-3.1
+0.0
+0.0
+0.1
stress
2-pentyl-furan 1.335528 mM
-1.4
+0.8
-0.6
-0.3
-0.0
nitrogen source
L-Isoleucine (N)
-2.8
+1.6
+0.0
-0.5
+0.2
stress
2-pentyl-furan 2.671 mM
+1.0
-2.9
-0.1
+0.4
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.4
+1.1
-0.2
-0.1
-0.5
carbon source
D-Gluconic Acid (C)
-1.3
-0.8
+0.6
+0.6
+0.1
motility
outer cut, LB soft agar motility assay
+1.4
-1.4
+0.9
-0.1
-0.0
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