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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS27295 and AZOBR_RS27300 are separated by 608 nucleotides
AZOBR_RS27300 and AZOBR_RS27305 are separated by 417 nucleotides
AZOBR_RS27305 and AZOBR_RS27310 are separated by 50 nucleotides
AZOBR_RS27310 and AZOBR_RS27315 are separated by 200 nucleotides
AZOBR_RS27295: AZOBR_RS27295 - hypothetical protein, at 266,596 to 267,804
_RS27295
AZOBR_RS27300: AZOBR_RS27300 - hypothetical protein, at 268,413 to 268,670
_RS27300
AZOBR_RS27305: AZOBR_RS27305 - hypothetical protein, at 269,088 to 270,512
_RS27305
AZOBR_RS27310: AZOBR_RS27310 - chitinase, at 270,563 to 271,510
_RS27310
AZOBR_RS27315: AZOBR_RS27315 - RNA polymerase sigma 70, at 271,711 to 272,217
_RS27315
Group
Condition
AZOBR
_RS27295
AZOBR
_RS27300
AZOBR
_RS27305
AZOBR
_RS27310
AZOBR
_RS27315
stress
2-pentyl-furan 1.780666667 mM
-3.0
N.D.
-3.3
+0.2
-0.3
stress
2-pentyl-furan 1.780666667 mM
-4.0
N.D.
-2.4
-0.1
+0.1
stress
2-pentyl-furan 1.780666667 mM
-2.9
N.D.
-2.7
-0.0
-0.2
stress
2-pentyl-furan 1.335528 mM
-3.4
N.D.
-2.4
+0.1
-0.0
stress
2-pentyl-furan 1.335528 mM
-2.9
N.D.
-2.3
+0.2
-0.5
stress
2-pentyl-furan 1.335528 mM
-3.0
N.D.
-1.9
+0.4
+0.0
stress
3-octanone 6.3476 mM
-0.5
N.D.
-1.1
+0.1
-0.0
stress
Cobalt chloride 0.2 mM
+0.1
N.D.
-0.5
-0.5
-0.4
stress
2-pentyl-furan 1.335528 mM
-1.1
N.D.
-0.5
+0.5
-0.1
stress
nitrite 10 mM
+0.4
N.D.
-0.2
-0.7
-0.0
stress
Cobalt chloride 0.3 mM
+0.3
N.D.
-0.3
-0.4
-0.1
carbon source
D-Gluconic Acid (C)
-0.1
N.D.
+0.4
-0.4
-0.3
stress
2-Furfuraldehyde 0.2 vol%
-0.1
N.D.
-0.7
+0.3
+0.2
motility
inner cut, LB soft agar motility assay
+0.5
N.D.
-0.5
-0.4
+0.1
stress
Benzethonium chloride 0.003 mM
+0.4
N.D.
-0.3
-0.4
+0.1
nitrogen source
nitrate (N)
+0.3
N.D.
+0.3
-0.3
-0.2
nitrogen source
L-Threonine (N)
+0.3
N.D.
+0.4
+0.0
-0.5
anaerobic; rich media
LB; anaerobic
-0.2
N.D.
+0.6
-0.2
+0.1
stress
3-octanone 6.3476 mM
+0.2
N.D.
+0.7
-0.3
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
N.D.
+1.0
-0.5
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.3
N.D.
-0.1
-0.7
+0.4
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
-0.1
N.D.
+0.5
+0.3
+0.3
stress
D-Cycloserine 0.125 mg/ml
+0.4
N.D.
+0.6
+0.1
-0.1
stress
2-pentyl-furan 2.671 mM
+0.6
N.D.
+0.5
+0.0
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.7
N.D.
+1.1
-0.7
-0.0
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
-0.0
N.D.
+0.2
+0.3
+0.6
carbon source
D-Gluconic Acid (C)
+0.4
N.D.
+0.6
+0.0
+0.2
lb
LB
+0.3
N.D.
+0.6
+0.1
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
N.D.
+1.2
-0.0
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
N.D.
+0.8
+0.3
+0.4
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