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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS26800 and AZOBR_RS26805 are separated by 427 nucleotides
AZOBR_RS26805 and AZOBR_RS26810 are separated by 60 nucleotides
AZOBR_RS26810 and AZOBR_RS26815 are separated by 173 nucleotides
AZOBR_RS26815 and AZOBR_RS26820 are separated by 30 nucleotides
AZOBR_RS26800: AZOBR_RS26800 - hypothetical protein, at 162,231 to 162,803
_RS26800
AZOBR_RS26805: AZOBR_RS26805 - malonyl-CoA synthase, at 163,231 to 164,769
_RS26805
AZOBR_RS26810: AZOBR_RS26810 - quinone oxidoreductase, at 164,830 to 165,810
_RS26810
AZOBR_RS26815: AZOBR_RS26815 - 3-hydroxyisobutyrate dehydrogenase, at 165,984 to 166,883
_RS26815
AZOBR_RS26820: AZOBR_RS26820 - ABC transporter permease, at 166,914 to 168,113
_RS26820
Group
Condition
AZOBR
_RS26800
AZOBR
_RS26805
AZOBR
_RS26810
AZOBR
_RS26815
AZOBR
_RS26820
stress
2-pentyl-furan 1.780666667 mM
-4.0
+0.2
+0.2
-0.3
+0.0
stress
2-pentyl-furan 2.671 mM
-3.7
+0.2
+0.3
+0.2
+0.1
stress
2-pentyl-furan 1.335528 mM
-2.6
+0.3
-0.1
-0.2
-0.2
stress
3-octanone 6.3476 mM
-1.3
-0.1
-0.2
+0.1
-0.7
stress
2-pentyl-furan 1.335528 mM
-1.1
-0.2
-0.2
-0.0
-0.0
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
-1.4
+0.2
-0.0
+0.1
-0.3
dmso control
DMSO control
-1.5
+0.1
-0.2
+0.1
-0.0
stress
1-octen-3-ol 0.7753276667 mM
-1.3
-0.2
+0.1
+0.0
+0.0
stress
3-octanone 4.2317 mM
-1.3
+0.2
-0.0
-0.1
-0.1
motility
inner cut, LB soft agar motility assay
-1.0
-0.1
-0.3
+0.1
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
-1.1
-0.1
-0.1
+0.0
+0.1
stress
2-pentyl-furan 1.780666667 mM
-1.6
+0.1
+0.1
+0.4
-0.1
carbon source
a-Ketoglutaric (C)
-0.7
-0.3
-0.2
+0.1
+0.0
stress
3-octanone 6.3476 mM
-1.0
+0.1
-0.3
+0.2
-0.1
stress
1-octen-3-ol 0.7753276667 mM
-1.4
+0.3
-0.1
+0.0
+0.1
motility
outer cut, LB soft agar motility assay
-1.3
+0.1
+0.2
+0.3
-0.1
stress
2-pentyl-furan 1.335528 mM
-0.9
+0.4
+0.1
-0.1
-0.2
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
-0.4
+0.1
-0.3
+0.4
-0.3
stress
2-Furfuraldehyde 0.2 vol%
+0.5
+0.1
-0.1
-0.0
-0.9
nitrogen source
nitrate (N)
+0.5
+0.0
-0.4
-0.3
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-0.1
+0.1
+0.5
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.6
-0.5
-0.1
+0.1
stress
3-octanone 6.3476 mM
-0.8
+0.3
+0.4
+0.4
-0.3
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
-0.5
+0.2
+0.3
+0.4
-0.2
nitrogen source
Cytosine (N)
+0.8
-0.4
+0.0
+0.1
+0.1
stress
D-Cycloserine 0.125 mg/ml
+0.4
+0.2
+0.4
+0.2
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.1
-0.3
+0.4
-0.1
-0.1
nitrogen source
L-Asparagine (N)
+0.9
+0.2
+0.1
+0.1
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.6
+0.2
+0.5
-0.4
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.6
+0.2
+0.3
-0.1
+0.2
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