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Protein
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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS26770 and AZOBR_RS26775 are separated by 763 nucleotides
AZOBR_RS26775 and AZOBR_RS26780 are separated by 45 nucleotides
AZOBR_RS26780 and AZOBR_RS26785 are separated by 659 nucleotides
AZOBR_RS26785 and AZOBR_RS26790 are separated by 412 nucleotides
AZOBR_RS26770: AZOBR_RS26770 - hypothetical protein, at 155,689 to 155,904
_RS26770
AZOBR_RS26775: AZOBR_RS26775 - hisitidine kinase, at 156,668 to 157,786
_RS26775
AZOBR_RS26780: AZOBR_RS26780 - hypothetical protein, at 157,832 to 159,070
_RS26780
AZOBR_RS26785: AZOBR_RS26785 - hypothetical protein, at 159,730 to 159,984
_RS26785
AZOBR_RS26790: AZOBR_RS26790 - copper-containing nitrite reductase, at 160,397 to 161,461
_RS26790
Group
Condition
AZOBR
_RS26770
AZOBR
_RS26775
AZOBR
_RS26780
AZOBR
_RS26785
AZOBR
_RS26790
stress
2-pentyl-furan 1.335528 mM
N.D.
-1.4
-0.4
-2.4
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.5570485 mM
N.D.
-0.0
-0.8
-3.4
+0.1
stress
3-octanone 6.3476 mM
N.D.
-0.5
-0.5
-2.8
-0.3
stress
3-octanone 6.3476 mM
N.D.
-0.2
-0.3
-3.1
-0.3
stress
2-pentyl-furan 1.780666667 mM
N.D.
-0.3
-0.1
-3.2
+0.1
stress
3-octanone 5.2896 mM
N.D.
-0.5
-0.4
-2.1
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
N.D.
+0.0
-0.3
-2.5
+0.1
lb no stress control
LB no stress control
N.D.
+0.0
-0.0
-2.1
+0.0
stress
1-octen-3-ol 0.7753276667 mM
N.D.
-0.3
+0.0
-1.8
+0.1
lb no stress control
LB no stress control
N.D.
-0.5
-0.0
-1.4
-0.0
stress
1-octen-3-ol 0.7753276667 mM
N.D.
-0.4
-0.2
-1.4
+0.0
stress
1-octen-3-ol 0.6030326667 mM
N.D.
-0.1
+0.0
-1.8
-0.0
stress
1-octen-3-ol 0.6030326667 mM
N.D.
-0.1
-0.1
-1.6
+0.1
stress
2-pentyl-furan 1.780666667 mM
N.D.
-0.1
+0.2
-1.5
-0.0
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
N.D.
+0.1
-0.2
-1.3
+0.1
stress
1-octen-3-ol 0.6784116667 mM
N.D.
-0.4
-0.1
-1.0
+0.3
stress
2-pentyl-furan 2.671 mM
N.D.
+0.5
+0.5
-2.2
+0.1
motility
outer cut, LB soft agar motility assay
N.D.
-1.6
+0.4
+0.3
+0.4
motility
inner cut, LB soft agar motility assay
N.D.
-0.3
-0.9
+1.1
+0.1
carbon source
a-Ketoglutaric (C)
N.D.
-0.4
+1.3
-0.4
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.8
+0.4
+0.8
-0.0
carbon source
a-Ketoglutaric (C)
N.D.
-0.4
+1.5
-0.3
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.2
+0.6
+0.5
-0.3
motility
inner cut, LB soft agar motility assay
N.D.
-0.2
-0.1
+1.1
+0.1
nitrogen source
L-Isoleucine (N)
N.D.
-0.3
+1.5
-0.3
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.2
+0.4
+1.0
+0.0
nitrogen source
Cytosine (N)
N.D.
+0.1
+1.3
-0.2
-0.0
carbon source
Glycerol (C)
N.D.
-0.3
+1.8
+0.0
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.4
+0.6
+0.8
+0.0
carbon source
Glycerol (C)
N.D.
+0.0
+1.4
+0.4
-0.0
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