Fitness for 5 genes in Azospirillum brasilense Sp245

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	AZOBR_RS26590	AZOBR_RS26595	AZOBR_RS26600	AZOBR_RS26605	AZOBR_RS26610
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	-0.2	N.D.	+0.1	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	-0.1	-0.5	N.D.	+0.1	-0.6
carbon source	D,L-Lactate (C)	-0.1	-0.2	N.D.	-0.0	-0.6
stress	3-octanone 6.3476 mM	-0.8	+0.3	N.D.	+0.1	-0.4
nitrogen source	L-Phenylalanine (N)	-0.3	+0.1	N.D.	+0.1	-0.6
stress	Sisomicin 0.01 mg/ml	-0.5	+0.2	N.D.	-0.1	-0.1
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-0.5	+0.1	N.D.	+0.2	-0.3
stress	3-octanone 6.3476 mM	+0.0	+0.1	N.D.	+0.2	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7	+0.1	N.D.	+0.2	+0.0
stress	6-Pentyl-2H-pyran-2-one 0.6266795 mM	+0.1	+0.1	N.D.	+0.0	-0.6
stress	2-pentyl-furan 1.780666667 mM	+0.2	+0.1	N.D.	-0.0	-0.6
stress	3-octanone 6.3476 mM	-0.2	+0.3	N.D.	-0.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5	-0.8	N.D.	+0.0	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-0.5	+0.1	N.D.	+0.2	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	-0.2	N.D.	-0.1	+0.7
carbon source	D-Gluconic Acid (C)	+0.1	-0.3	N.D.	+0.0	+0.6
stress	3-octanone 5.2896 mM	+0.7	+0.2	N.D.	+0.0	-0.4
stress	2-pentyl-furan 1.335528 mM	+1.0	+0.1	N.D.	-0.2	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-0.0	N.D.	-0.1	+0.8
stress	3-octanone 5.2896 mM	+0.5	+0.0	N.D.	+0.2	-0.2
motility	outer cut, LB soft agar motility assay	+0.0	-0.3	N.D.	-0.0	+0.9
stress	Cobalt chloride 0.2 mM	+0.3	-0.1	N.D.	-0.1	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	+0.4	+0.3	N.D.	+0.2	-0.1
stress	2-pentyl-furan 1.335528 mM	+0.5	+0.1	N.D.	-0.2	+0.3
nitrogen fixation	L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days	+0.4	+0.1	N.D.	+0.2	+0.3
motility	inner cut, LB soft agar motility assay	+0.3	+0.2	N.D.	+0.2	+0.4
stress	Benzethonium chloride 0.003 mM	+0.7	+0.1	N.D.	+0.2	+0.3
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days	+0.3	+0.2	N.D.	+0.1	+0.7
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days	+0.4	+0.3	N.D.	+0.2	+0.6
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	+0.4	+0.3	N.D.	+0.6	+0.4