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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS25915 and AZOBR_RS25920 are separated by 49 nucleotides
AZOBR_RS25920 and AZOBR_RS25925 are separated by 180 nucleotides
AZOBR_RS25925 and AZOBR_RS25930 are separated by 15 nucleotides
AZOBR_RS25930 and AZOBR_RS25935 are separated by 22 nucleotides
AZOBR_RS25915: AZOBR_RS25915 - ATPase, at 868,880 to 869,446
_RS25915
AZOBR_RS25920: AZOBR_RS25920 - flavodoxin, at 869,496 to 869,963
_RS25920
AZOBR_RS25925: AZOBR_RS25925 - type II citrate synthase, at 870,144 to 871,427
_RS25925
AZOBR_RS25930: AZOBR_RS25930 - aldose 1-epimerase, at 871,443 to 872,306
_RS25930
AZOBR_RS25935: AZOBR_RS25935 - antibiotic resistance protein, at 872,329 to 872,976
_RS25935
Group
Condition
AZOBR
_RS25915
AZOBR
_RS25920
AZOBR
_RS25925
AZOBR
_RS25930
AZOBR
_RS25935
stress
Paraquat dichloride 0.04 mg/ml
-0.8
+0.2
-0.1
N.D.
-2.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.4
+0.1
-0.1
N.D.
-1.1
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-0.9
-0.3
+0.1
N.D.
-0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+0.1
-0.2
N.D.
-1.1
stress
2-pentyl-furan 1.780666667 mM
-0.2
-0.2
-0.0
N.D.
-1.0
stress
3-octanone 5.2896 mM
-0.5
-0.1
-0.1
N.D.
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.7
-0.1
+0.0
N.D.
-0.6
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-0.7
-0.1
-0.1
N.D.
-0.2
lb
LB
-0.3
+0.1
-0.2
N.D.
-0.6
stress
2-Furfuraldehyde 0.2 vol%
+0.5
-0.2
-0.2
N.D.
-1.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
-0.1
-0.2
N.D.
+0.2
stress
Cobalt chloride 0.2 mM
-1.1
+0.2
+0.0
N.D.
+0.4
motility
outer cut, LB soft agar motility assay
-0.7
-0.1
+0.2
N.D.
+0.3
stress
nitrate 100 mM
+0.3
+0.1
-0.0
N.D.
-0.6
carbon source
D-Gluconic Acid (C)
+0.6
+0.3
-0.2
N.D.
-0.7
motility
inner cut, LB soft agar motility assay
-0.6
-0.1
+0.1
N.D.
+0.7
carbon source
Ethanol (C)
+0.5
+0.1
+0.1
N.D.
-0.4
stress
Cobalt chloride 0.3 mM
-0.7
+0.2
+0.1
N.D.
+0.8
stress
Benzethonium chloride 0.003 mM
+0.7
-0.1
+0.2
N.D.
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.0
-0.0
+0.3
N.D.
-0.9
carbon source
Glycerol (C)
+0.4
-0.3
+0.3
N.D.
+0.1
stress
2-pentyl-furan 2.671 mM
-0.4
+0.1
+0.2
N.D.
+0.6
nitrogen source
Parabanic Acid (N)
+1.1
-0.1
-0.1
N.D.
-0.4
carbon source
a-Ketoglutaric (C)
+0.4
+0.2
-0.2
N.D.
+0.4
nitrogen source
L-Histidine (N)
+0.1
-0.1
+0.2
N.D.
+0.7
stress
3-octanone 6.3476 mM
-0.1
+0.0
-0.3
N.D.
+1.2
nitrogen source
Glucuronamide (N)
+0.9
-0.1
-0.0
N.D.
+0.1
nitrogen source
Cytosine (N)
+0.8
+0.1
-0.1
N.D.
+0.2
nitrogen source
Urea (N)
+0.7
-0.0
-0.0
N.D.
+0.4
stress
Nickel (II) chloride 0.5 mM
+0.3
+0.1
+0.1
N.D.
+1.0
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