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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS25910 and AZOBR_RS25915 overlap by 11 nucleotides
AZOBR_RS25915 and AZOBR_RS25920 are separated by 49 nucleotides
AZOBR_RS25920 and AZOBR_RS25925 are separated by 180 nucleotides
AZOBR_RS25925 and AZOBR_RS25930 are separated by 15 nucleotides
AZOBR_RS25910: AZOBR_RS25910 - oxidoreductase, at 868,117 to 868,890
_RS25910
AZOBR_RS25915: AZOBR_RS25915 - ATPase, at 868,880 to 869,446
_RS25915
AZOBR_RS25920: AZOBR_RS25920 - flavodoxin, at 869,496 to 869,963
_RS25920
AZOBR_RS25925: AZOBR_RS25925 - type II citrate synthase, at 870,144 to 871,427
_RS25925
AZOBR_RS25930: AZOBR_RS25930 - aldose 1-epimerase, at 871,443 to 872,306
_RS25930
Group
Condition
AZOBR
_RS25910
AZOBR
_RS25915
AZOBR
_RS25920
AZOBR
_RS25925
AZOBR
_RS25930
stress
Paraquat dichloride 0.04 mg/ml
-2.0
-0.8
+0.2
-0.1
N.D.
stress
Sisomicin 0.01 mg/ml
-2.0
-0.2
+0.1
-0.1
N.D.
lb
LB
-1.2
-0.3
+0.1
-0.2
N.D.
stress
Cobalt chloride 0.2 mM
-0.7
-1.1
+0.2
+0.0
N.D.
stress
D-Cycloserine 0.125 mg/ml
-1.2
-0.1
+0.1
-0.1
N.D.
motility
inner cut, LB soft agar motility assay
-0.6
-0.6
-0.1
+0.1
N.D.
stress
Chlorite 1 mM
-1.0
-0.0
+0.0
+0.1
N.D.
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
+0.4
-0.9
-0.3
+0.1
N.D.
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
+0.5
-0.7
-0.1
-0.1
N.D.
nitrogen source
casaminos (N)
-0.6
+0.6
-0.1
-0.1
N.D.
stress
2-Furfuraldehyde 0.2 vol%
-0.4
+0.5
-0.2
-0.2
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
-0.7
+0.4
-0.0
+0.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.2
-1.4
+0.1
-0.1
N.D.
lb
LB
-0.7
+0.1
+0.1
+0.4
N.D.
nitrogen source
L-Asparagine (N)
-0.6
+0.5
+0.0
+0.0
N.D.
carbon source
a-Ketoglutaric (C)
-0.4
+0.4
+0.2
-0.2
N.D.
nitrogen source
L-Serine (N)
-0.7
+0.6
+0.1
+0.0
N.D.
stress
Benzethonium chloride 0.003 mM
-0.7
+0.7
-0.1
+0.2
N.D.
carbon source
D-Gluconic Acid (C)
-0.4
+0.6
+0.3
-0.2
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
+0.8
-0.3
-0.2
-0.0
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+1.0
-0.7
-0.1
+0.0
N.D.
stress
2-pentyl-furan 2.671 mM
+0.6
-0.4
+0.1
+0.2
N.D.
stress
3-octanone 6.3476 mM
+0.8
-0.1
+0.0
-0.3
N.D.
nitrogen source
Glucuronamide (N)
-0.1
+0.9
-0.1
-0.0
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
+0.9
-0.1
+0.2
+0.0
N.D.
carbon source
D,L-Lactate (C)
+0.5
+0.6
-0.0
+0.1
N.D.
nitrogen source
L-Leucine (N)
+0.6
+0.7
-0.0
+0.1
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.6
+0.3
+0.4
+0.0
N.D.
nitrogen source
Parabanic Acid (N)
+0.5
+1.1
-0.1
-0.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.6
+1.0
-0.0
+0.3
N.D.
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