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Protein
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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS24060 and AZOBR_RS24065 are separated by 463 nucleotides
AZOBR_RS24065 and AZOBR_RS24070 are separated by 296 nucleotides
AZOBR_RS24070 and AZOBR_RS24075 are separated by 72 nucleotides
AZOBR_RS24075 and AZOBR_RS24080 are separated by 116 nucleotides
AZOBR_RS24060: AZOBR_RS24060 - multidrug transporter, at 435,941 to 437,047
_RS24060
AZOBR_RS24065: AZOBR_RS24065 - aspartate aminotransferase, at 437,511 to 438,689
_RS24065
AZOBR_RS24070: AZOBR_RS24070 - acetyl-CoA hydrolase, at 438,986 to 440,479
_RS24070
AZOBR_RS24075: AZOBR_RS24075 - hypothetical protein, at 440,552 to 440,905
_RS24075
AZOBR_RS24080: AZOBR_RS24080 - methyl-accepting chemotaxis protein, at 441,022 to 442,725
_RS24080
Group
Condition
AZOBR
_RS24060
AZOBR
_RS24065
AZOBR
_RS24070
AZOBR
_RS24075
AZOBR
_RS24080
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.6
-0.1
-1.5
-0.1
motility
outer cut, LB soft agar motility assay
+0.0
-0.4
+0.2
-1.1
-0.8
motility
inner cut, LB soft agar motility assay
+0.1
-0.1
+0.2
-1.2
-0.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
+0.3
-0.0
-1.1
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.2
+0.1
-0.8
-0.4
lb
LB
+0.0
-0.4
-0.1
-0.3
-0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.0
+0.1
-0.8
-0.4
nitrogen source
nitrate (N)
-0.0
-0.4
+0.1
-1.3
+0.2
stress
3-octanone 6.3476 mM
-0.2
-0.4
-0.0
+0.2
-0.8
motility
inner cut, LB soft agar motility assay
+0.1
-0.2
+0.0
-1.2
-0.0
stress
2-Furfuraldehyde 0.2 vol%
+0.1
+0.2
-0.1
-1.0
-0.5
carbon source
D-Lactate (C)
-0.1
-0.3
+0.1
-0.2
-0.8
stress
3-octanone 6.3476 mM
-0.2
+0.1
+0.0
-0.3
-0.9
nitrogen source
casaminos (N)
-0.0
-0.1
+0.2
-1.5
+0.5
nitrogen source
L-Threonine (N)
+0.1
-0.0
+0.0
-0.7
-0.4
lb
LB
-0.1
-0.4
+0.4
-0.5
-0.2
stress
D-Cycloserine 0.125 mg/ml
+0.1
+0.2
-0.0
-1.3
+0.3
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
+0.1
-0.2
-0.1
-0.7
+0.5
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
-0.1
+0.0
+0.2
-0.8
+0.1
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
-0.2
+0.4
+0.2
-0.5
-0.1
carbon source
D-Gluconic Acid (C)
-0.1
+0.1
+0.2
-1.1
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
-0.3
-0.4
-0.1
+0.4
stress
3-octanone 4.2317 mM
-0.1
-0.2
-0.1
+0.5
-0.3
nitrogen source
L-Glutamic (N)
-0.1
-0.0
-0.3
+0.5
-0.3
stress
2-pentyl-furan 1.780666667 mM
-0.1
-0.1
-0.0
+0.8
-0.5
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
+0.1
+0.1
+0.1
+0.8
-0.9
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
+0.1
-0.1
+0.4
+0.4
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-0.1
+0.2
+0.4
+0.7
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
+0.0
+0.3
+0.2
+0.5
+0.3
stress
2-pentyl-furan 1.780666667 mM
+0.1
-0.1
+0.5
-0.1
+0.9
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