Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS23555 and AZOBR_RS23560 are separated by 107 nucleotidesAZOBR_RS23560 and AZOBR_RS23565 overlap by 4 nucleotidesAZOBR_RS23565 and AZOBR_RS23575 are separated by 2538 nucleotidesAZOBR_RS23575 and AZOBR_RS23580 are separated by 221 nucleotides AZOBR_RS23555: AZOBR_RS23555 - beta-lactamase, at 315,105 to 315,995 _RS23555 AZOBR_RS23560: AZOBR_RS23560 - LysR family transcriptional regulator, at 316,103 to 316,978 _RS23560 AZOBR_RS23565: AZOBR_RS23565 - D-threo-aldose 1-dehydrogenase, at 316,975 to 317,925 _RS23565 AZOBR_RS23575: AZOBR_RS23575 - ABC transporter, at 320,464 to 321,519 _RS23575 AZOBR_RS23580: AZOBR_RS23580 - membrane protein, at 321,741 to 322,877 _RS23580
Group Condition AZOBR_RS23555 AZOBR_RS23560 AZOBR_RS23565 AZOBR_RS23575 AZOBR_RS23580
stress 2-pentyl-furan 1.335528 mM +0.4 -4.0 -0.2 +0.1 -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.8 -0.6 -0.6 -0.3 -1.1
lb LB -1.0 -1.2 -0.7 -0.6 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -1.4 -0.8 -0.5 +0.2
stress Cobalt chloride 0.2 mM -1.4 -0.6 -0.1 +0.0 -0.5
stress Paraquat dichloride 0.02 mg/ml -1.2 -0.7 -0.0 -0.0 -0.6
motility inner cut, LB soft agar motility assay -0.8 -1.0 -0.1 -0.2 -0.2
stress D-Cycloserine 0.125 mg/ml -1.8 +0.4 -0.7 +0.7 -1.0
stress 3-octanone 6.3476 mM -1.0 -0.3 -0.1 -0.6 -0.1
stress 3-octanone 6.3476 mM +0.5 +0.3 -0.3 -0.4 -1.9
carbon source D-Gluconic Acid (C) +0.3 -0.8 -0.3 -0.2 -0.6
stress 2-pentyl-furan 1.780666667 mM -1.8 +0.6 -0.3 -0.1 +0.1
motility outer cut, LB soft agar motility assay -1.3 +0.0 +0.3 -0.5 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 +0.3 +0.5 -0.5 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 +0.2 +0.1 +0.2 -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.6 +0.8 -0.1 -0.1 -1.2
stress 2-pentyl-furan 2.671 mM +0.3 -0.4 +0.0 +0.2 -0.9
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.0 +0.3 +0.1 +0.3 -0.4
motility inner cut, LB soft agar motility assay +0.2 -1.1 +0.4 +0.0 -0.2
stress Paraquat dichloride 0.04 mg/ml -0.9 -0.3 +0.5 +0.3 -0.1
stress 1-octen-3-ol 0.6030326667 mM -0.4 +0.8 -0.1 -0.3 -0.3
stress 2-pentyl-furan 1.335528 mM +0.9 -0.3 +0.2 -0.3 -0.7
stress Sisomicin 0.01 mg/ml -0.3 +0.9 +0.1 -0.4 -0.4
stress 2-pentyl-furan 1.780666667 mM +1.1 +0.2 +0.0 -0.6 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +0.5 +0.3 +0.2 -0.7
stress 2-pentyl-furan 1.335528 mM +0.5 +0.2 -0.2 -0.1 +0.9
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +1.0 +0.8 +0.2 +0.3 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.4 -0.3 +0.2 +0.1
nitrogen source L-Isoleucine (N) +1.6 +0.3 -0.1 -0.1 +0.5
stress 2-pentyl-furan 1.780666667 mM +0.9 +0.6 +0.1 +0.3 +0.6
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