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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS23525 and AZOBR_RS23530 are separated by 13 nucleotides
AZOBR_RS23530 and AZOBR_RS23535 are separated by 65 nucleotides
AZOBR_RS23535 and AZOBR_RS23540 are separated by 152 nucleotides
AZOBR_RS23540 and AZOBR_RS23545 are separated by 14 nucleotides
AZOBR_RS23525: AZOBR_RS23525 - ABC transporter ATP-binding protein, at 306,498 to 307,307
_RS23525
AZOBR_RS23530: AZOBR_RS23530 - putative Major facilitator family transporter, at 307,321 to 308,514
_RS23530
AZOBR_RS23535: AZOBR_RS23535 - exodeoxyribonuclease V, at 308,580 to 309,776
_RS23535
AZOBR_RS23540: AZOBR_RS23540 - tetrathionate reductase subunit A, at 309,929 to 313,036
_RS23540
AZOBR_RS23545: AZOBR_RS23545 - tetrathionate reductase, at 313,051 to 314,184
_RS23545
Group
Condition
AZOBR
_RS23525
AZOBR
_RS23530
AZOBR
_RS23535
AZOBR
_RS23540
AZOBR
_RS23545
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
-0.1
-3.5
-0.0
+0.1
stress
3-octanone 6.3476 mM
-2.5
+0.0
-0.0
+0.3
-0.0
nitrogen source
L-Glutamic (N)
-0.7
+0.2
-1.0
-0.3
-0.3
stress
Paraquat dichloride 0.02 mg/ml
-0.7
+0.0
-0.8
-0.2
-0.2
motility
inner cut, LB soft agar motility assay
-0.9
-0.2
-0.0
-0.1
-0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-0.3
-0.7
+0.2
-0.6
stress
Sisomicin 0.01 mg/ml
-0.5
+0.1
-0.7
-0.3
-0.3
stress
Cobalt chloride 0.2 mM
-0.7
+0.2
-0.4
-0.4
-0.1
carbon source
L-Proline (C)
+0.0
-0.1
-0.7
-0.2
-0.4
carbon source
D-Gluconic Acid (C)
-0.5
-0.2
-1.1
-0.0
+0.5
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
-0.3
-0.5
-0.4
-0.3
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
-1.2
+0.1
-0.0
+0.2
-0.1
stress
3-octanone 4.2317 mM
-0.5
-0.0
-0.8
+0.0
+0.3
stress
1-octen-3-ol 0.6784116667 mM
-0.7
-0.1
-0.4
-0.0
+0.3
stress
1-octen-3-ol 0.7753276667 mM
-0.5
+0.1
-0.7
+0.1
+0.2
stress
Paraquat dichloride 0.04 mg/ml
-0.6
+0.2
+0.3
-0.4
-0.3
stress
3-octanone 6.3476 mM
-0.7
-0.1
-0.1
+0.3
-0.1
dmso control
DMSO control
-0.5
+0.2
-0.7
+0.1
+0.2
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
-0.8
+0.2
+0.2
-0.1
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
-0.1
-0.7
-0.3
+0.4
nitrogen source
L-Threonine (N)
+0.4
-0.2
-0.4
-0.3
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.6
-0.0
-1.1
+0.3
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+1.0
-0.3
-0.6
-0.1
-0.0
stress
2-pentyl-furan 1.335528 mM
-0.6
-0.1
+0.2
-0.1
+0.4
motility
inner cut, LB soft agar motility assay
+0.4
-0.2
-0.6
+0.0
+0.4
stress
1-octen-3-ol 0.6784116667 mM
-0.6
+0.1
+0.3
-0.1
+0.3
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
+0.1
+0.1
-0.7
+0.2
+0.3
carbon source
L-Lactate (C)
+0.5
-0.2
+0.4
-0.1
-0.3
stress
3-octanone 5.2896 mM
-0.5
+0.1
+0.6
+0.2
+0.0
nitrogen source
L-Histidine (N)
+0.5
-0.1
+0.4
-0.3
+0.0
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