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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS23210 and AZOBR_RS23215 are separated by 84 nucleotides
AZOBR_RS23215 and AZOBR_RS23220 are separated by 898 nucleotides
AZOBR_RS23220 and AZOBR_RS23225 are separated by 131 nucleotides
AZOBR_RS23225 and AZOBR_RS23230 are separated by 254 nucleotides
AZOBR_RS23210: AZOBR_RS23210 - hypothetical protein, at 219,056 to 219,445
_RS23210
AZOBR_RS23215: AZOBR_RS23215 - hypothetical protein, at 219,530 to 220,465
_RS23215
AZOBR_RS23220: AZOBR_RS23220 - beta-aspartyl peptidase, at 221,364 to 223,352
_RS23220
AZOBR_RS23225: AZOBR_RS23225 - hypothetical protein, at 223,484 to 223,723
_RS23225
AZOBR_RS23230: AZOBR_RS23230 - hypothetical protein, at 223,978 to 225,396
_RS23230
Group
Condition
AZOBR
_RS23210
AZOBR
_RS23215
AZOBR
_RS23220
AZOBR
_RS23225
AZOBR
_RS23230
stress
2-pentyl-furan 1.335528 mM
N.D.
N.D.
+0.2
-3.9
+0.0
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
-0.6
-1.5
-0.3
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
-0.5
-1.5
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.0
-2.4
+0.3
stress
Cobalt chloride 0.2 mM
N.D.
N.D.
-1.0
-0.5
-0.3
stress
Benzethonium chloride 0.003 mM
N.D.
N.D.
-0.1
-1.4
-0.2
lb no stress control
LB no stress control
N.D.
N.D.
-0.5
-1.0
+0.0
motility
inner cut, LB soft agar motility assay
N.D.
N.D.
-0.2
-1.0
-0.2
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
N.D.
N.D.
+0.2
-1.8
+0.3
stress
1-octen-3-ol 0.6784116667 mM
N.D.
N.D.
+0.1
-1.4
-0.0
stress
1-octen-3-ol 0.6784116667 mM
N.D.
N.D.
-0.7
-0.5
-0.0
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
N.D.
N.D.
+0.1
-1.4
+0.1
stress
3-octanone 5.2896 mM
N.D.
N.D.
-0.4
-0.8
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
-0.9
-0.2
+0.1
stress
3-octanone 4.2317 mM
N.D.
N.D.
+0.0
-1.1
+0.0
stress
3-octanone 6.3476 mM
N.D.
N.D.
+0.2
-1.2
-0.1
nitrogen source
L-Histidine (N)
N.D.
N.D.
+0.1
-1.2
+0.2
stress
1-octen-3-ol 0.7753276667 mM
N.D.
N.D.
+0.1
-0.9
+0.3
nitrogen source
L-Citrulline (N)
N.D.
N.D.
+0.4
-1.1
+0.1
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
N.D.
N.D.
+0.4
-0.6
+0.1
stress
2-pentyl-furan 1.335528 mM
N.D.
N.D.
-0.6
+0.7
+0.0
stress
2-pentyl-furan 1.780666667 mM
N.D.
N.D.
-0.4
+0.7
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
-0.6
+1.0
+0.1
nitrogen source
L-Threonine (N)
N.D.
N.D.
-0.3
+0.8
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
-0.2
+0.7
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+0.6
+0.5
-0.1
nitrogen source
L-Glutamic (N)
N.D.
N.D.
-0.2
+0.9
+0.5
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
N.D.
N.D.
+0.5
+0.6
+0.2
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
N.D.
N.D.
+0.8
+0.3
+0.3
stress
2-pentyl-furan 1.780666667 mM
N.D.
N.D.
+0.2
+1.3
+0.2
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