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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS22695 and AZOBR_RS22700 overlap by 4 nucleotides
AZOBR_RS22700 and AZOBR_RS22705 are separated by 46 nucleotides
AZOBR_RS22705 and AZOBR_RS22710 are separated by 38 nucleotides
AZOBR_RS22710 and AZOBR_RS22715 are separated by 107 nucleotides
AZOBR_RS22695: AZOBR_RS22695 - hypothetical protein, at 102,774 to 102,974
_RS22695
AZOBR_RS22700: AZOBR_RS22700 - hypothetical protein, at 102,971 to 103,423
_RS22700
AZOBR_RS22705: AZOBR_RS22705 - 3-ketoacyl-CoA reductase, at 103,470 to 104,246
_RS22705
AZOBR_RS22710: AZOBR_RS22710 - gluconolactonase, at 104,285 to 105,175
_RS22710
AZOBR_RS22715: AZOBR_RS22715 - C4-dicarboxylate ABC transporter permease, at 105,283 to 106,743
_RS22715
Group
Condition
AZOBR
_RS22695
AZOBR
_RS22700
AZOBR
_RS22705
AZOBR
_RS22710
AZOBR
_RS22715
carbon source
D-Gluconic Acid (C)
-4.7
+0.6
-0.7
-0.2
-0.7
stress
2-pentyl-furan 1.335528 mM
-2.3
-0.8
-0.1
-0.2
-1.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-2.9
-0.0
-0.9
-0.4
-0.3
stress
3-octanone 6.3476 mM
-2.3
-0.7
-0.4
-0.0
-0.5
stress
3-octanone 6.3476 mM
-2.4
-0.3
-0.5
+0.1
-0.6
nitrogen source
L-Threonine (N)
-1.4
-1.3
-0.1
-0.4
-0.4
stress
3-octanone 6.3476 mM
-2.1
-0.7
+0.4
-0.0
-1.0
motility
outer cut, LB soft agar motility assay
-1.9
+0.7
-1.2
-0.3
-0.7
stress
3-octanone 4.2317 mM
-2.3
-0.7
+0.0
+0.0
-0.3
stress
1-octen-3-ol 0.7753276667 mM
-2.3
-0.0
-0.3
-0.1
-0.5
stress
3-octanone 6.3476 mM
-2.3
+0.0
+0.1
-0.5
-0.4
lb no stress control
LB no stress control
-2.3
-0.1
+0.2
-0.2
-0.5
stress
1-octen-3-ol 0.6784116667 mM
-2.3
-0.2
+0.1
-0.2
-0.3
stress
2-pentyl-furan 1.335528 mM
-2.4
-0.4
-0.4
+0.3
+0.4
stress
6-Pentyl-2H-pyran-2-one 0.7162051667 mM
-2.3
-0.2
+0.2
-0.4
+0.3
stress
2-pentyl-furan 1.780666667 mM
-2.3
-0.5
-0.0
+0.6
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.6266795 mM
-2.2
+0.2
+0.4
-0.3
-0.3
nitrogen source
L-Isoleucine (N)
-1.7
+0.0
-1.7
+0.5
+0.8
stress
3-octanone 5.2896 mM
-2.3
-0.3
+0.6
-0.1
+0.2
stress
2-pentyl-furan 1.335528 mM
-2.2
+0.7
+0.3
-0.7
+0.3
stress
2-pentyl-furan 2.671 mM
-2.1
+0.0
+0.8
-0.0
-0.1
nitrogen source
casaminos (N)
-1.0
-0.6
-0.6
+0.3
+0.8
lb no stress control
LB no stress control
-2.3
+0.3
+0.6
-0.0
+0.6
stress
1-octen-3-ol 0.6784116667 mM
-2.2
+0.2
+0.1
+0.2
+1.0
nitrogen source
L-Histidine (N)
-0.6
+0.3
-1.3
+0.2
+0.7
stress
3-octanone 5.2896 mM
-2.3
+0.5
+0.5
+0.1
+0.6
stress
2-pentyl-furan 1.335528 mM
-2.3
+0.1
+0.6
+0.1
+0.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.2
+0.4
+0.5
+0.6
-0.4
stress
2-pentyl-furan 1.780666667 mM
+1.6
-0.3
-1.2
-1.0
+0.9
motility
inner cut, LB soft agar motility assay
+0.7
+0.8
-0.7
+0.1
+1.1
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