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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS22120 and AZOBR_RS22125 are separated by 677 nucleotides
AZOBR_RS22125 and AZOBR_RS22130 are separated by 3 nucleotides
AZOBR_RS22130 and AZOBR_RS22135 are separated by 172 nucleotides
AZOBR_RS22135 and AZOBR_RS22140 are separated by 13 nucleotides
AZOBR_RS22120: AZOBR_RS22120 - hypothetical protein, at 1,727,713 to 1,728,528
_RS22120
AZOBR_RS22125: AZOBR_RS22125 - secretion protein, at 1,729,206 to 1,730,339
_RS22125
AZOBR_RS22130: AZOBR_RS22130 - acriflavin resistance protein, at 1,730,343 to 1,733,465
_RS22130
AZOBR_RS22135: AZOBR_RS22135 - transglutaminase, at 1,733,638 to 1,734,591
_RS22135
AZOBR_RS22140: AZOBR_RS22140 - hypothetical protein, at 1,734,605 to 1,737,094
_RS22140
Group
Condition
AZOBR
_RS22120
AZOBR
_RS22125
AZOBR
_RS22130
AZOBR
_RS22135
AZOBR
_RS22140
stress
2-pentyl-furan 1.335528 mM
-0.8
-0.5
-0.1
-0.1
-0.5
stress
2-Furfuraldehyde 0.2 vol%
-0.6
-0.4
-0.3
+0.0
-0.3
stress
3-octanone 6.3476 mM
-0.9
+0.0
+0.1
-0.2
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.8
-0.3
+0.1
+0.5
+0.3
nitrogen source
L-Threonine (N)
+0.8
-0.1
+0.0
-1.0
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
-0.5
-0.3
+0.2
+0.1
nitrogen source
L-Threonine (N)
-0.4
-0.2
+0.1
-0.3
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.8
-0.4
-0.1
+0.0
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.3
-0.1
+0.2
+0.3
+0.3
nitrogen source
Glucuronamide (N)
+0.7
-0.2
-0.0
-0.5
-0.5
nitrogen source
Glucuronamide (N)
+0.6
+0.0
+0.0
-0.4
-0.6
stress
2-pentyl-furan 2.671 mM
+0.3
-0.5
-0.0
+0.1
-0.3
nitrogen source
L-Leucine (N)
+0.5
-0.1
-0.2
-0.4
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.2
-0.3
+0.3
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.6
-0.1
-0.1
+0.3
+0.4
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
+0.6
+0.0
+0.1
-0.5
-0.3
stress
1-octen-3-ol 0.6784116667 mM
+0.5
-0.4
+0.1
+0.0
-0.3
carbon source
D-Gluconic Acid (C)
+0.2
-0.4
+0.2
+0.3
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.1
+0.3
-0.1
+0.4
+0.6
nitrogen source
L-Lysine (N)
+0.7
-0.1
+0.1
-0.2
-0.3
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
+0.8
+0.1
+0.1
-0.1
-0.3
nitrogen source
L-Phenylalanine (N)
+0.8
+0.1
+0.0
+0.1
-0.4
motility
inner cut, LB soft agar motility assay
+1.1
-0.3
-0.1
+0.2
-0.2
nitrogen source
L-Isoleucine (N)
+0.5
+0.1
+0.3
-0.3
+0.3
nitrogen source
L-Glutamic (N)
+1.2
+0.2
-0.2
-0.3
+0.0
motility
outer cut, LB soft agar motility assay
+1.0
-0.1
-0.2
+0.1
+0.3
stress
Benzethonium chloride 0.003 mM
+1.0
+0.2
-0.1
+0.0
+0.1
stress
Paraquat dichloride 0.04 mg/ml
+1.4
+0.1
+0.1
+0.1
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
+0.1
+0.0
+0.3
+0.6
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
+0.3
+0.4
+0.1
+0.3
+0.2
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