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Protein
Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS21715 and AZOBR_RS21720 are separated by 233 nucleotides
AZOBR_RS21720 and AZOBR_RS21725 are separated by 48 nucleotides
AZOBR_RS21725 and AZOBR_RS21730 are separated by 45 nucleotides
AZOBR_RS21730 and AZOBR_RS21735 overlap by 4 nucleotides
AZOBR_RS21715: AZOBR_RS21715 - hypothetical protein, at 1,648,445 to 1,649,116
_RS21715
AZOBR_RS21720: AZOBR_RS21720 - hypothetical protein, at 1,649,350 to 1,650,225
_RS21720
AZOBR_RS21725: AZOBR_RS21725 - imidazolonepropionase, at 1,650,274 to 1,651,488
_RS21725
AZOBR_RS21730: AZOBR_RS21730 - hypothetical protein, at 1,651,534 to 1,651,782
_RS21730
AZOBR_RS21735: AZOBR_RS21735 - hypothetical protein, at 1,651,779 to 1,652,204
_RS21735
Group
Condition
AZOBR
_RS21715
AZOBR
_RS21720
AZOBR
_RS21725
AZOBR
_RS21730
AZOBR
_RS21735
stress
2-pentyl-furan 1.335528 mM
-0.0
-0.2
-0.1
N.D.
-0.8
stress
2-pentyl-furan 1.780666667 mM
-0.3
-0.3
+0.0
N.D.
-0.5
stress
3-octanone 5.2896 mM
-0.2
-0.3
-0.2
N.D.
-0.4
nitrogen source
L-Histidine (N)
-0.2
+0.1
-0.2
N.D.
-0.7
stress
3-octanone 6.3476 mM
-0.0
-0.7
-0.5
N.D.
+0.3
stress
2-pentyl-furan 2.671 mM
-0.4
+0.2
+0.1
N.D.
-0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.4
-0.3
N.D.
+0.2
carbon source
D,L-Lactate (C)
-0.3
+0.2
-0.2
N.D.
-0.4
motility
inner cut, LB soft agar motility assay
-0.5
-0.3
+0.1
N.D.
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.4
-0.0
-0.8
N.D.
+0.8
stress
2-pentyl-furan 1.335528 mM
+0.2
-0.3
-0.5
N.D.
+0.0
nitrogen source
Glucuronamide (N)
-0.2
+0.2
+0.2
N.D.
-0.4
stress
2-pentyl-furan 1.780666667 mM
+0.4
+0.0
-0.0
N.D.
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
+0.6
-0.5
N.D.
-0.3
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
+0.2
+0.3
-0.6
N.D.
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
+0.6
-0.2
N.D.
-0.5
lb
LB
-0.3
+0.4
-0.2
N.D.
+0.4
nitrogen source
L-Glutamic (N)
-0.1
+0.1
-0.2
N.D.
+0.7
stress
Paraquat dichloride 0.02 mg/ml
+0.3
+0.3
-0.4
N.D.
+0.2
nitrogen source
L-Isoleucine (N)
+0.6
+0.5
-0.5
N.D.
-0.1
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
+0.2
+0.1
-0.2
N.D.
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.3
+0.4
N.D.
+0.3
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-0.2
-0.0
+0.2
N.D.
+0.6
supernatant control
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
-0.2
+0.2
+0.3
N.D.
+0.5
motility
inner cut, LB soft agar motility assay
+0.2
+0.5
-0.4
N.D.
+0.6
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
+0.1
+0.4
+0.1
N.D.
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.2
-0.2
N.D.
+0.8
stress
Benzethonium chloride 0.003 mM
+0.2
+0.3
-0.1
N.D.
+0.8
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
+0.3
+0.6
-0.1
N.D.
+0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.4
+0.1
N.D.
+2.4
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