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Protein
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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS21675 and AZOBR_RS21680 are separated by 43 nucleotides
AZOBR_RS21680 and AZOBR_RS21685 are separated by 268 nucleotides
AZOBR_RS21685 and AZOBR_RS21690 are separated by 32 nucleotides
AZOBR_RS21690 and AZOBR_RS21695 are separated by 665 nucleotides
AZOBR_RS21675: AZOBR_RS21675 - hypothetical protein, at 1,641,724 to 1,642,245
_RS21675
AZOBR_RS21680: AZOBR_RS21680 - hypothetical protein, at 1,642,289 to 1,642,576
_RS21680
AZOBR_RS21685: AZOBR_RS21685 - formyltetrahydrofolate deformylase, at 1,642,845 to 1,643,711
_RS21685
AZOBR_RS21690: AZOBR_RS21690 - regulator, at 1,643,744 to 1,644,538
_RS21690
AZOBR_RS21695: AZOBR_RS21695 - hypothetical protein, at 1,645,204 to 1,645,683
_RS21695
Group
Condition
AZOBR
_RS21675
AZOBR
_RS21680
AZOBR
_RS21685
AZOBR
_RS21690
AZOBR
_RS21695
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.1
N.D.
-2.3
N.D.
motility
outer cut, LB soft agar motility assay
-0.1
+0.6
N.D.
-2.1
N.D.
stress
Cobalt chloride 0.3 mM
-0.1
-0.0
N.D.
-1.2
N.D.
carbon source
a-Ketoglutaric (C)
-0.1
-0.0
N.D.
-0.9
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.1
N.D.
-0.7
N.D.
nitrogen source
casaminos (N)
-0.2
-0.2
N.D.
-0.6
N.D.
stress
3-octanone 6.3476 mM
-0.0
-0.7
N.D.
-0.1
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.0
N.D.
-0.5
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
-0.3
-0.3
N.D.
-0.3
N.D.
carbon source
L-Proline (C)
-0.1
-0.3
N.D.
-0.5
N.D.
stress
Chlorite 1 mM
+0.1
-0.0
N.D.
-0.8
N.D.
carbon source
a-Ketoglutaric (C)
-0.1
+0.3
N.D.
-0.9
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.2
-0.1
N.D.
-0.7
N.D.
nitrogen source
Parabanic Acid (N)
-0.0
+0.4
N.D.
-0.9
N.D.
nitrogen source
L-Histidine (N)
+0.2
-0.4
N.D.
-0.3
N.D.
motility
inner cut, LB soft agar motility assay
-0.2
-0.3
N.D.
+0.3
N.D.
stress
Cobalt chloride 0.2 mM
+0.2
+0.3
N.D.
-0.7
N.D.
stress
Nickel (II) chloride 0.5 mM
+0.3
+0.3
N.D.
-0.8
N.D.
stress
2-pentyl-furan 1.335528 mM
+0.2
+0.2
N.D.
-0.5
N.D.
carbon source
pyruvate (C)
+0.2
+0.2
N.D.
-0.5
N.D.
motility
inner cut, LB soft agar motility assay
+0.1
+0.4
N.D.
-0.5
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
-0.1
+0.5
N.D.
-0.4
N.D.
nitrogen source
L-Aspartic Acid (N)
-0.3
+0.0
N.D.
+0.8
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.3
N.D.
+0.4
N.D.
lb
LB
+0.1
+0.3
N.D.
+0.4
N.D.
carbon source
L-Leucine (C)
+0.1
+0.0
N.D.
+0.7
N.D.
stress
3-octanone 6.3476 mM
+0.2
+0.1
N.D.
+0.7
N.D.
stress
Benzethonium chloride 0.003 mM
-0.0
+0.7
N.D.
+0.4
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
+0.3
-0.3
N.D.
+1.4
N.D.
stress
2-pentyl-furan 2.671 mM
+0.1
+0.6
N.D.
+0.7
N.D.
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AZOBR_RS21685
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