Fitness for 5 genes in Azospirillum brasilense Sp245

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 167 experiments or choose conditions or try the comparative fitness browser

500 ntAZOBR_RS20300 and AZOBR_RS20305 are separated by 107 nucleotidesAZOBR_RS20305 and AZOBR_RS20310 are separated by 169 nucleotidesAZOBR_RS20310 and AZOBR_RS20315 are separated by 243 nucleotidesAZOBR_RS20315 and AZOBR_RS20320 are separated by 202 nucleotides AZOBR_RS20300: AZOBR_RS20300 - ribonuclease HII, at 1,324,559 to 1,325,173 _RS20300 AZOBR_RS20305: AZOBR_RS20305 - cAMP-binding protein, at 1,325,281 to 1,326,003 _RS20305 AZOBR_RS20310: AZOBR_RS20310 - hypothetical protein, at 1,326,173 to 1,326,670 _RS20310 AZOBR_RS20315: AZOBR_RS20315 - cold-shock protein, at 1,326,914 to 1,327,492 _RS20315 AZOBR_RS20320: AZOBR_RS20320 - carboxyl-terminal protease, at 1,327,695 to 1,329,143 _RS20320
Group Condition AZOBR_RS20300 AZOBR_RS20305 AZOBR_RS20310 AZOBR_RS20315 AZOBR_RS20320
nitrogen source casaminos (N) -3.5 -0.0 +0.0 N.D. -0.0
lb LB -3.3 -0.2 +0.7 N.D. -0.4
stress Vancomycin 0.03 mg/ml -1.2 +0.0 +0.0 N.D. -2.0
stress 3-octanone 6.3476 mM -1.8 -0.3 -0.5 N.D. -0.5
stress Bacitracin 0.25 mg/ml -0.5 -0.3 -0.1 N.D. -2.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.2 +0.1 -0.5 N.D. -0.5
motility inner cut, LB soft agar motility assay -3.1 -0.2 +0.3 N.D. +0.2
motility inner cut, LB soft agar motility assay -1.7 -0.2 +0.5 N.D. -1.1
nitrogen source D-Alanine (N) -1.6 -0.1 +0.1 N.D. -0.9
stress 2-pentyl-furan 1.780666667 mM -1.8 +0.1 -0.1 N.D. -0.5
nitrogen source casaminos (N) -2.0 -0.1 +0.2 N.D. -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -0.1 +0.4 N.D. -0.4
stress 6-Pentyl-2H-pyran-2-one 0.6266795 mM -1.7 -0.2 +0.2 N.D. -0.3
stress copper (II) chloride 2 mM -0.3 -0.1 +0.3 N.D. -1.9
nitrogen source L-Glutamic (N) -1.3 +0.3 -0.3 N.D. -0.6
stress 1-octen-3-ol 0.7753276667 mM -1.7 -0.1 +0.1 N.D. -0.1
stress 1-octen-3-ol 0.7753276667 mM -1.7 -0.2 +0.4 N.D. -0.2
carbon source D-Gluconic Acid (C) -0.7 -0.6 +0.3 N.D. -0.6
stress 2-pentyl-furan 1.780666667 mM -1.7 +0.1 -0.1 N.D. +0.3
stress Paraquat dichloride 0.04 mg/ml -0.3 +0.3 +0.4 N.D. -1.4
nitrogen source L-Threonine (N) -1.2 +0.5 +0.3 N.D. -0.3
stress Paraquat dichloride 0.02 mg/ml +0.9 -0.4 +0.4 N.D. -1.0
lb LB -1.2 -0.1 +0.3 N.D. +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +0.1 +0.6 N.D. -1.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.6 -0.4 +0.6 N.D. -0.4
carbon source Glycerol (C) +1.0 +0.3 +0.3 N.D. -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.7 +0.3 -0.0 N.D. -0.4
nitrogen source L-Histidine (N) +1.8 +0.5 -0.0 N.D. -0.2
motility inner cut, LB soft agar motility assay +2.3 -0.6 +0.2 N.D. +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.7 -0.0 -0.4 N.D. -0.1
remove
AZOBR_RS20300
plot		 remove
AZOBR_RS20305
plot		 remove
AZOBR_RS20310		 remove
AZOBR_RS20315
plot		 remove
AZOBR_RS20320
plot