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Homologs
Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS20270 and AZOBR_RS20275 are separated by 128 nucleotides
AZOBR_RS20275 and AZOBR_RS20280 are separated by 38 nucleotides
AZOBR_RS20280 and AZOBR_RS20285 are separated by 1397 nucleotides
AZOBR_RS20285 and AZOBR_RS20290 are separated by 79 nucleotides
AZOBR_RS20270: AZOBR_RS20270 - hypothetical protein, at 1,317,690 to 1,318,169
_RS20270
AZOBR_RS20275: AZOBR_RS20275 - adenine glycosylase, at 1,318,298 to 1,319,380
_RS20275
AZOBR_RS20280: AZOBR_RS20280 - hypothetical protein, at 1,319,419 to 1,320,180
_RS20280
AZOBR_RS20285: AZOBR_RS20285 - hypothetical protein, at 1,321,578 to 1,322,786
_RS20285
AZOBR_RS20290: AZOBR_RS20290 - dihydroneopterin aldolase, at 1,322,866 to 1,323,249
_RS20290
Group
Condition
AZOBR
_RS20270
AZOBR
_RS20275
AZOBR
_RS20280
AZOBR
_RS20285
AZOBR
_RS20290
carbon source
L-Malic (C)
N.D.
-0.4
-0.3
-0.2
N.D.
nitrogen source
nitrate (N)
N.D.
-0.6
-0.3
-0.0
N.D.
motility
outer cut, LB soft agar motility assay
N.D.
+0.2
-0.3
-0.7
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB
N.D.
+0.7
-0.9
-0.3
N.D.
stress
2-pentyl-furan 1.780666667 mM
N.D.
-0.6
-0.1
+0.3
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
-0.7
+0.4
+0.1
N.D.
stress
Thallium(I) acetate 0.008 mg/ml
N.D.
-0.4
+0.5
-0.3
N.D.
nitrogen source
L-Leucine (N)
N.D.
-0.5
+0.4
+0.1
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.2
-0.4
+0.3
N.D.
stress
3-octanone 6.3476 mM
N.D.
-0.4
+0.3
+0.2
N.D.
stress
copper (II) chloride 2 mM
N.D.
-0.4
+0.3
+0.3
N.D.
stress
2-Furfuraldehyde 0.2 vol%
N.D.
+0.8
-0.5
+0.2
N.D.
stress
Benzethonium chloride 0.003 mM
N.D.
+0.6
+0.4
-0.5
N.D.
motility
inner cut, LB soft agar motility assay
N.D.
+0.2
+0.8
-0.3
N.D.
carbon source
Glycerol (C)
N.D.
-0.2
+0.7
+0.1
N.D.
carbon source
D-Lactate (C)
N.D.
+0.3
+0.4
+0.2
N.D.
nitrogen source
L-Threonine (N)
N.D.
+0.5
+0.3
+0.1
N.D.
carbon source
pyruvate (C)
N.D.
+0.3
+0.3
+0.3
N.D.
nitrogen source
D-Alanine (N)
N.D.
+0.3
+0.5
+0.2
N.D.
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
N.D.
+0.6
+0.5
-0.1
N.D.
lb
LB
N.D.
+0.3
+0.6
+0.2
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.5
+0.5
+0.1
N.D.
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
N.D.
+0.2
+1.0
-0.1
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
N.D.
+0.0
+0.9
+0.3
N.D.
carbon source
L-Lactate (C)
N.D.
+0.2
+0.6
+0.4
N.D.
nitrogen source
Glucuronamide (N)
N.D.
+0.3
+0.4
+0.5
N.D.
stress
Sisomicin 0.01 mg/ml
N.D.
+0.4
+0.2
+0.6
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
N.D.
+0.4
+0.6
+0.3
N.D.
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
N.D.
+0.3
+0.7
+0.3
N.D.
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
N.D.
+0.1
+0.9
+0.4
N.D.
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