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Fitness for 5 genes in
Azospirillum brasilense Sp245
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AZOBR_RS20235 and AZOBR_RS20240 are separated by 91 nucleotides
AZOBR_RS20240 and AZOBR_RS20245 are separated by 163 nucleotides
AZOBR_RS20245 and AZOBR_RS20250 are separated by 160 nucleotides
AZOBR_RS20250 and AZOBR_RS20260 are separated by 1284 nucleotides
AZOBR_RS20235: AZOBR_RS20235 - transcriptional regulator, at 1,309,463 to 1,310,107
_RS20235
AZOBR_RS20240: AZOBR_RS20240 - histidine kinase, at 1,310,199 to 1,310,633
_RS20240
AZOBR_RS20245: AZOBR_RS20245 - membrane protein, at 1,310,797 to 1,311,495
_RS20245
AZOBR_RS20250: AZOBR_RS20250 - hypothetical protein, at 1,311,656 to 1,312,129
_RS20250
AZOBR_RS20260: AZOBR_RS20260 - chromosome segregation ATPase, at 1,313,414 to 1,316,875
_RS20260
Group
Condition
AZOBR
_RS20235
AZOBR
_RS20240
AZOBR
_RS20245
AZOBR
_RS20250
AZOBR
_RS20260
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
-1.3
N.D.
-1.6
-0.5
-0.3
stress
D-Cycloserine 0.125 mg/ml
-1.7
N.D.
-0.1
-0.5
-1.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-2.3
N.D.
-0.0
-0.1
-0.7
stress
Chlorite 1 mM
-1.2
N.D.
+0.0
-1.1
-0.7
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
-1.2
N.D.
-2.2
+0.0
+0.6
motility
inner cut, LB soft agar motility assay
-0.7
N.D.
-0.8
+0.3
-1.4
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days
-1.4
N.D.
-1.8
-0.2
+0.9
stress
Cobalt chloride 0.3 mM
-2.0
N.D.
-0.0
-0.0
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.9
N.D.
+0.3
-0.7
-0.9
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 8 days
-1.0
N.D.
-0.9
-0.2
-0.0
lb
LB
-1.1
N.D.
-0.4
-0.5
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-2.0
N.D.
-0.1
+0.3
-0.1
nitrogen fixation
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days
-0.8
N.D.
-1.5
-0.0
+0.4
nitrogen fixation control
L-Malic (C) with ammonium chloride; anaerobic; 3 days
-0.9
N.D.
-1.2
-0.2
+0.4
stress
Cobalt chloride 0.2 mM
-0.8
N.D.
-0.6
+0.2
-0.6
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
-0.8
N.D.
-1.3
-0.1
+0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.9
N.D.
+0.4
+0.0
-1.1
stress
Vancomycin 0.03 mg/ml
-0.9
N.D.
+0.3
+0.1
-0.8
nitrogen fixation
L-Malic (C) and no Nitrogen; Wolfe's minerals without nitroloacetic acid; 3 days
-0.5
N.D.
-0.9
+0.2
+0.6
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
-0.5
N.D.
-0.8
+0.1
+0.6
carbon source
D-Gluconic Acid (C)
+0.8
N.D.
-0.7
-0.3
-0.4
nitrogen source
L-Histidine (N)
-0.6
N.D.
-0.0
-0.6
+0.9
nitrogen source
L-Isoleucine (N)
+2.3
N.D.
-0.4
-1.4
-0.0
carbon source
a-Ketoglutaric (C)
+1.8
N.D.
+0.1
-0.5
-0.4
motility
outer cut, LB soft agar motility assay
+1.8
N.D.
-0.7
+0.4
-0.1
carbon source
Glycerol (C)
+2.3
N.D.
+0.1
-0.2
-0.5
carbon source
D-Gluconic Acid (C)
+1.4
N.D.
+0.1
-0.2
+0.4
carbon source
a-Ketoglutaric (C)
+2.1
N.D.
+0.1
-0.1
-0.3
carbon source
Glycerol (C)
+1.8
N.D.
+0.0
-0.2
+0.6
nitrogen fixation
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
+2.1
N.D.
+0.1
+0.1
+0.3
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