Fitness for 5 genes in Azospirillum brasilense Sp245

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500 ntAZOBR_RS19655 and AZOBR_RS19665 are separated by 1484 nucleotidesAZOBR_RS19665 and AZOBR_RS19670 are separated by 108 nucleotidesAZOBR_RS19670 and AZOBR_RS19675 are separated by 161 nucleotidesAZOBR_RS19675 and AZOBR_RS19680 are separated by 258 nucleotides AZOBR_RS19655: AZOBR_RS19655 - spermidine/putrescine ABC transporter substrate-binding protein, at 1,178,920 to 1,179,966 _RS19655 AZOBR_RS19665: AZOBR_RS19665 - LysR family transcripitonal regulator, at 1,181,451 to 1,182,368 _RS19665 AZOBR_RS19670: AZOBR_RS19670 - acyl-CoA dehydrogenase, at 1,182,477 to 1,183,679 _RS19670 AZOBR_RS19675: AZOBR_RS19675 - CoA transferase, at 1,183,841 to 1,185,043 _RS19675 AZOBR_RS19680: AZOBR_RS19680 - membrane protein, at 1,185,302 to 1,186,228 _RS19680
Group Condition AZOBR_RS19655 AZOBR_RS19665 AZOBR_RS19670 AZOBR_RS19675 AZOBR_RS19680
nitrogen source L-Lysine (N) -0.3 -0.7 -0.7 -0.5 +0.0
stress 2-pentyl-furan 1.335528 mM -0.5 -0.7 -0.3 -0.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.5 -0.2 -0.1 -0.7
nitrogen source L-Lysine (N) +0.0 -0.6 -0.5 -0.3 -0.2
stress Cobalt chloride 0.3 mM -0.1 -0.0 -0.4 +0.1 -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.1 -0.5 -0.5 -0.2
stress 1-octen-3-ol 0.6030326667 mM -0.3 -0.6 -0.3 -0.0 +0.2
lb LB -0.5 -0.4 -0.4 +0.3 -0.1
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 -1.0 +0.2 -0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.4 -0.3 +0.1 -0.4
motility outer cut, LB soft agar motility assay +0.2 -1.1 -0.7 -0.0 +0.8
motility inner cut, LB soft agar motility assay -0.1 -1.1 -0.4 +0.3 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.4 -0.2 -0.4 -0.4
nitrogen source casaminos (N) +0.2 -0.9 -0.2 -0.1 +0.2
nitrogen source L-Isoleucine (N) +0.5 -1.3 +0.1 -0.4 +0.6
stress 2-pentyl-furan 1.780666667 mM -0.1 +0.4 -0.2 +0.0 -0.5
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.1 -0.3 +0.4 +0.1 -0.4
motility inner cut, LB soft agar motility assay -0.3 -0.5 -0.4 +0.3 +0.6
stress 3-octanone 6.3476 mM -0.4 +0.4 -0.4 +0.2 -0.1
stress D-Cycloserine 0.125 mg/ml +0.5 -0.5 -0.5 -0.2 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.5 -0.2 -0.3 -0.2
stress Paraquat dichloride 0.04 mg/ml -0.6 +0.6 +0.0 +0.0 -0.1
nitrogen source nitrate (N) -0.0 +0.6 -0.0 +0.1 -0.5
stress 2-pentyl-furan 1.780666667 mM -0.6 +0.3 -0.1 -0.1 +0.7
stress Sisomicin 0.01 mg/ml +0.0 +0.7 -0.4 -0.1 +0.1
nitrogen source L-Glutamic (N) +0.2 +1.0 -0.2 -0.1 +0.3
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.1 +0.1 +0.7 +0.4 -0.0
motility inner cut, LB soft agar motility assay +0.0 +0.7 -0.3 +0.1 +0.8
nitrogen source L-Phenylalanine (N) +0.3 +0.4 +0.1 +0.1 +0.4
carbon source D-Gluconic Acid (C) +0.2 +0.7 +0.3 +0.0 +0.1
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