Fitness for 5 genes in Azospirillum brasilense Sp245

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 167 experiments or choose conditions or try the comparative fitness browser

500 ntAZOBR_RS19580 and AZOBR_RS19585 are separated by 172 nucleotidesAZOBR_RS19585 and AZOBR_RS19590 are separated by 27 nucleotidesAZOBR_RS19590 and AZOBR_RS19595 are separated by 245 nucleotidesAZOBR_RS19595 and AZOBR_RS19600 are separated by 152 nucleotides AZOBR_RS19580: AZOBR_RS19580 - AsnC family transcriptional regulator, at 1,163,915 to 1,164,343 _RS19580 AZOBR_RS19585: AZOBR_RS19585 - arginase, at 1,164,516 to 1,165,463 _RS19585 AZOBR_RS19590: AZOBR_RS19590 - ornithine-oxoacid aminotransferase, at 1,165,491 to 1,166,708 _RS19590 AZOBR_RS19595: AZOBR_RS19595 - deacylase, at 1,166,954 to 1,168,069 _RS19595 AZOBR_RS19600: AZOBR_RS19600 - hypothetical protein, at 1,168,222 to 1,168,737 _RS19600
Group Condition AZOBR_RS19580 AZOBR_RS19585 AZOBR_RS19590 AZOBR_RS19595 AZOBR_RS19600
nitrogen source L-Citrulline (N) -3.0 N.D. -2.0 -0.2 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 N.D. -0.3 -0.6 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.1 N.D. -0.4 +0.1 -0.2
nitrogen source L-Glutamic (N) -0.7 N.D. -0.5 -0.8 -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6 N.D. -0.4 -0.8 +0.0
nitrogen source L-Citrulline (N) -1.8 N.D. -0.4 -0.1 -0.3
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.5 N.D. -0.8 -0.5 +0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.5 N.D. +0.3 -0.8 -0.4
stress 6-Pentyl-2H-pyran-2-one 0.6266795 mM -1.1 N.D. -0.4 -0.2 -0.7
stress 1-octen-3-ol 0.6784116667 mM -0.9 N.D. -0.4 -0.2 -0.4
stress 1-octen-3-ol 0.7753276667 mM -1.2 N.D. -0.2 -0.1 -0.4
stress Aluminum chloride 5 mM -0.9 N.D. -0.1 -0.3 -0.5
stress 2-pentyl-furan 1.335528 mM -0.1 N.D. -0.4 +0.1 -1.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.1 N.D. -0.9 -0.8 -0.1
nitrogen source L-Serine (N) -0.9 N.D. -0.2 +0.2 -0.5
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.4 N.D. -0.7 +0.4 -0.2
stress 3-octanone 5.2896 mM -1.1 N.D. +0.3 +0.1 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 N.D. -0.1 -0.9 -0.4
stress 3-octanone 6.3476 mM +0.7 N.D. +0.8 -0.2 -1.9
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.5 N.D. -0.6 +0.6 +0.2
nitrogen source L-Histidine (N) +0.4 N.D. -0.5 +0.3 -0.6
nitrogen source L-Isoleucine (N) +1.2 N.D. -1.1 -0.3 +0.1
nitrogen source nitrate (N) +0.7 N.D. -0.4 +0.2 -0.6
stress 1-octen-3-ol 0.6784116667 mM -0.8 N.D. -0.0 +0.4 +0.4
stress 2-pentyl-furan 2.671 mM +0.8 N.D. -0.8 +0.9 -1.0
nitrogen source L-Aspartic Acid (N) +0.9 N.D. -0.6 +0.1 -0.3
stress 1-octen-3-ol 0.6030326667 mM +0.3 N.D. +0.5 +0.1 -0.7
motility outer cut, LB soft agar motility assay +0.6 N.D. -0.6 +1.4 +0.3
stress Chlorite 1 mM +1.0 N.D. +0.7 +0.4 -0.3
motility inner cut, LB soft agar motility assay +0.7 N.D. +1.4 +0.4 -0.4
remove
AZOBR_RS19580
plot
remove
AZOBR_RS19585
plot
remove
AZOBR_RS19590
remove
AZOBR_RS19595
plot
remove
AZOBR_RS19600
plot